Enterobacter chengduensis: FY206_21145
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Entry
FY206_21145 CDS
T06229
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
echg
Enterobacter chengduensis
Pathway
echg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
echg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FY206_21145 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
echg03021
]
FY206_21145 (rpoD)
Transcription machinery [BR:
echg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FY206_21145 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_SUN2
Motif
Other DBs
NCBI-ProteinID:
QEL37736
UniProt:
A0A5C1C461
LinkDB
All DBs
Position
4373394..4375241
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AA seq
615 aa
AA seq
DB search
MEQNPQSQLKLLVQRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLLLAETSNNTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDMAPTA
THVGSELSQEEMDDDEDEDEEESDDDTADDDNSIDPELAREKFAELRTQYEVTRDTIKAK
GRSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVMMDRVRTQERIIMKLCVEQCKMP
KKNFITLFTGNETSETWFNAAIAMNKPWSEKLHDVKDDVHRGLQKLQQIEEETGLTIEQV
KDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDK
FEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREP
TPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTE
SLRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKL
RHPSRSEVLRSFLDD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctgaaacttcttgtccaacgtggtaaggagcaaggc
tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgattcagatcaa
atcgaagacatcatccaaatgatcaatgacatgggcattcaggtgatggaagaagcaccg
gatgccgatgatctgttgctggctgaaacctccaacaacactgacgaagatgcggaagaa
gctgctgcacaggtactgtccagcgtggaatctgaaatcgggcgtaccactgacccggtc
cgcatgtacatgcgcgaaatgggtaccgttgagctgttgacccgcgaaggcgaaattgac
atcgcaaaacgcatcgaagacgggatcaaccaggttcagtgctccgttgccgagtacccg
gaagcgattacctacctgctggagcagtacgatcgcgttgaagcggaagaagcgcgcctg
tctgacctgatcaccggttttgtcgacccgaacgctgaagaagatatggcgcctaccgcc
actcacgtcggttctgaactgtctcaggaagagatggatgacgacgaagacgaagatgag
gaagagagcgacgacgacaccgcggatgatgacaacagcatcgacccggagctggcgcgc
gagaagtttgccgagctgcgtacccagtacgaagtgacgcgtgacaccatcaaagcgaaa
ggccgcagccacgctgccgctcaggaagagatcctgaagctgtctgaagtgttcaaacag
ttccgcctggtgccaaaacagttcgactacctggtgaacagcatgcgcgtgatgatggat
cgcgtgcgcacccaggaacgcatcatcatgaagctgtgcgttgagcagtgcaaaatgccg
aagaagaacttcatcaccctcttcaccggcaacgagaccagcgaaacctggttcaacgcg
gctatcgcgatgaacaagccgtggtctgaaaaactgcacgacgtgaaggacgatgtccat
cgcggcctgcagaagctgcagcagattgaagaagagaccggcctgaccatcgagcaggtc
aaagacatcaaccgtcgtatgtctatcggtgaagcgaaagcccgccgtgcgaagaaagag
atggttgaagcgaacttgcgtctggttatctctatcgccaagaaatacaccaaccgcggt
ctgcagttcctggatctgattcaggaaggcaacatcggtctgatgaaagcggtagataag
tttgaataccgtcgtggttacaagttctccacctacgcaacctggtggatccgtcaggct
attacccgctctatcgcggatcaggcgcgcaccatccgtattccggtgcatatgattgag
accatcaacaagctcaaccgtatttcccgccagatgctgcaggagatgggccgcgagccg
acgccggaagagctggccgagcgcatgctgatgccggaagacaagatccgtaaggtgctg
aagatcgccaaagagccaatctccatggaaacaccgatcggtgacgatgaagattcgcat
ctgggtgatttcatcgaggataccaccctcgagctgccgctggactctgccaccaccgag
agcctgcgtgccgcaacgcacgacgttctggctggcctgaccgcccgtgaagcgaaagtc
ctgcgtatgcgtttcggtatcgacatgaacaccgaccacacgctggaagaagtgggtaaa
cagttcgacgttacccgcgaacgtatccgtcagatcgaagcgaaggcgctgcgtaagctg
cgtcacccaagccgctctgaagtgctgcgtagcttcctggacgattaa
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