Enterobacter chengduensis: FY206_21675
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Entry
FY206_21675 CDS
T06229
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
echg
Enterobacter chengduensis
Pathway
echg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
echg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FY206_21675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
echg03019
]
FY206_21675
03009 Ribosome biogenesis [BR:
echg03009
]
FY206_21675
Enzymes [BR:
echg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FY206_21675
Messenger RNA biogenesis [BR:
echg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FY206_21675
Ribosome biogenesis [BR:
echg03009
]
Prokaryotic type
rRNA helicases
FY206_21675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
DRTGG
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QEL37828
LinkDB
All DBs
Position
complement(4483476..4485371)
Genome browser
AA seq
631 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
SLPLLNNIDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPDG
HQTALFSATMPEAIRRITKRFMNDPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEADLPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLSQIQPVAEGEELD
METLAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRPERGGE
DRPRRERRDAGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRPDRGGERRGGGRSFGGERREGGRSEGR
GGEGRRFSGERRESRGPRREEGTSRRRFGDA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgtatcccacacctg
ctttctggtcgtgacgtgctgggcatggcccagactggtagcggtaaaactgcagcgttc
tcgctgccgctgctgaacaacattgatccggacctgcgtgcaccgcagatcctcgttctg
gctccaacccgtgaactggctgttcaggttgcagaagccatgacggaattctctaaacat
atgcgcggcgtaaacgtggtagccctgtacggcggccagcgttatgacgtgcagttacgc
gccctgcgccagggcccacagattgttgtcggtacgccgggccgtctgctggatcacctg
aagcgcggtacgctggatctctctaaactgagcggtctggtactggatgaagcagatgaa
atgctgcgtatgggcttcatcgaagacgttgaaaccatcatggcgcagatcccagacggt
catcagaccgcgctgttctctgccaccatgccggaagcgatccgtcgtatcaccaagcgc
ttcatgaacgatcctcaggaagtgcgcattcagtccagcgtcaccactcgcccggacatc
agccagagctactggtctgtgtacggcatgcgcaaaaacgaagcgctggtacgtttcctg
gaagcggaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgaccctggaa
gtggctgaagccctggagcgtagcggctacaacagcgcagcgctgaacggcgacatgaac
caggccctgcgtgagcagactctggagcgtctgaaagacggtcgtctggatattctgatt
gcaaccgacgtggcagcacgtggtctggacgttgagcgtatcagcctggttgtgaactac
gacatcccgatggattccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgctggccgcgcgctgctgttcgttgagaaccgcgagcgtcgcctgctgcgtaacatc
gaacgcaccatgaagctgaccattccagaagcggacctgccaaacgcagagctgctgggc
aaacgccgtctggaaaaattcgccgccaaagtacagcagcagctggaaagcagcgatctg
gatcagtaccgtgcgctgctgtcgcagattcagcctgttgctgaaggcgaagagctggac
atggaaaccctggctgcagcactgctgaaaatggctcagggcgaacgtagcctgatcgtg
ccacccgatgcgccgatgcgtcctaagcgtgaattccgtgaccgtgacgatcgcttcgag
cgtcgtggcgaccgtaacgaccgtggcccacgcggtgaccgtccagagcgtggtggtgaa
gaccgtccacgtcgtgaacgtcgcgacgcgggtgacatggaactgtaccgcattgaagtg
ggccgtgatgatggcgttgaagtgcgtcatatcgttggcgcgatcgctaacgaaggcgac
atcagcagccgttacatcggtaacatcaagctgttcgcatcccactctaccatcgagctg
ccaaaaggcatgccgggtgaagtgctgcagcactttacgcgtacccgcatcctgaacaag
ccgatgaacatgcagctgctgggcgatgcacagccacgtcctgaccgtggcggcgagcgt
cgtggcggtggtcgcagcttcggcggcgagcgtcgtgaaggcggtcgcagcgaaggtcgc
ggcggtgaaggtcgtcgtttctccggcgagcgtcgcgaaagccgtggcccacgtcgtgaa
gaaggcaccagccgtcgtcgtttcggtgacgcgtaa
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