Enterobacter chengduensis: FY206_22135
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Entry
FY206_22135 CDS
T06229
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
echg
Enterobacter chengduensis
Brite
KEGG Orthology (KO) [BR:
echg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
echg03019
]
FY206_22135 (csrD)
Messenger RNA biogenesis [BR:
echg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FY206_22135 (csrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
Motif
Other DBs
NCBI-ProteinID:
QEL37913
LinkDB
All DBs
Position
complement(4577702..4579642)
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AA seq
646 aa
AA seq
DB search
MRLTTKFSAFITLLTGLTIFVTLLGCSLSFYNAIQDKLVNRVQSVASVIDTRLLTTPLPA
LSRELDELMVPVDIVQIDIQQGAHRVLSHARPESYRPAGVVSQYREVTVHSLKNPGMTIH
MVYLDPMASYFRSMMTTAPLTVAVAFIVLLIFLAVRWLRRQLSGQELLEMRSVRILNGER
GPQVRGSVHEWPARASSALDTLLSEIQFASDQRSRMDSLIRSYAAQDNKTGLNNRLFFDN
QLATLLDDSEKVGTHGVVMMIRLPDFDLLRDTWGQRVAEENLFTLINLLSTFIMRYPGAL
LARYHRSDFAVLLPHRTLKESESIASQLLKAVDALPQSKMLDRDDMVHMGICAWRGGQST
EQVMEHAEAATRNAVLQGANGWAVYDDSLPEKGRGNVRWRTLIEQMLSRGGPRIYQKPAV
MKNGNVHHRELMCRIFDGTEEVISAEYLPMVLQFGLSEEYDRQQITRLMPFLSFWPEENL
ALQVTVESLIRPRFQRWLRDTLMQCEKSQRKHIIFELAEADVGQHISRLRPVVRLINALG
ARVAVTQAGLTLVSTNWIKELDVELLKLHPGLVRNIEKRTENQLLVQSLVEACKGTRTQV
FAAGVRSRAEWQMLTERGVMGGQGDFFAASQPLDTNVKKYLQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaagttctcagcttttatcaccttgctgacggggttgaccattttt
gtcacccttctgggctgttcgctaagcttttacaacgccatccaggacaagctggtcaat
cgggtgcagtccgttgcgtcggtgattgatacgcgtctgctgacaacgccgctaccggcg
ctctcccgcgagcttgatgagctgatggtacctgttgatattgttcagatcgacatccag
cagggagcgcatcgtgtgttaagccacgcgcggcccgaaagttaccgccccgcgggtgtg
gtgagtcagtatcgggaggtgacggtgcactcccttaaaaatccggggatgacgatacac
atggtctacctcgatccgatggccagctattttcgttccatgatgaccaccgcgccgctc
accgttgccgttgcgtttatcgtcctgctgatctttctcgcggtccgctggctgcgccgc
cagctctccggccaggaactcctggagatgcgctccgtaaggatccttaacggcgaacgt
ggcccgcaggtgcgtggctctgttcacgagtggccggcacgcgccagcagcgcgctcgat
acactgctctccgaaatccagtttgccagcgaccagcgcagccgaatggattcgctgatc
cgctcttatgcggcgcaggataataaaaccggccttaacaaccgccttttctttgataat
cagctcgccacgctgctcgacgattcagaaaaagtggggacgcacggggtggtgatgatg
attcgcctgcccgatttcgatctcctgcgcgacacctggggacagcgggtcgcggaagaa
aatctctttacgctgatcaacctgctctccacctttattatgcgctacccgggcgcgctg
ctggcccgctatcaccgcagcgactttgccgtgttgttgccgcatcgcacgctgaaggag
tcggaaagcatcgccagccagctgctgaaggcggtggatgccctgccgcagagcaaaatg
ctcgacagggacgatatggtccacatggggatctgcgcctggcgcggcgggcaatcgaca
gaacaagtgatggaacatgcggaagccgctacccgcaacgccgtgttgcagggggcgaac
ggatgggcggtgtatgatgactcgctgccggaaaaagggcgcggcaacgtgcgctggcgt
acgttgattgagcaaatgcttagccgcggcgggccacgtatctatcaaaaacccgcggtc
atgaaaaatgggaacgttcatcaccgtgaattaatgtgtcgtatttttgacggtacggaa
gaggttatctcggcggaatatctgccgatggtgctgcaatttggtctgtccgaagagtat
gaccgccagcaaattacccggctgatgccgtttttatccttctggccggaagagaacctg
gcgttacaggtcaccgtggagtcgttaatacgtccacgttttcagcgctggctacgtgat
acattaatgcaatgcgaaaaatcgcaacgcaaacacattatttttgaacttgctgaggcc
gatgtaggtcaacacatcagccggttacgtccggtggtccgtttgatcaatgcgctgggc
gcgcgtgtcgccgtgacgcaggcaggtttaacgctggtcagtaccaactggatcaaggag
ctggatgtggagctattaaagctccatccagggctggtaaggaatattgagaagcgtacg
gaaaaccagctgctggttcagagtctggtcgaagcctgcaagggaacgcgaacgcaggtc
tttgccgcgggcgtacgctccagagccgaatggcagatgttaacagagcgcggcgtcatg
ggtggtcagggggatttttttgctgcctctcagccgcttgacaccaacgtgaaaaaatat
ttgcaaagatactctgtttga
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