Echinicola soli: FKX85_00100
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Entry
FKX85_00100 CDS
T06084
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
echi
Echinicola soli
Pathway
echi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
echi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FKX85_00100 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
echi03019
]
FKX85_00100 (rny)
Messenger RNA biogenesis [BR:
echi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FKX85_00100 (rny)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
DUF4954
KH_2
Motif
Other DBs
NCBI-ProteinID:
QDH77526
UniProt:
A0A514CCI5
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Position
complement(18838..20403)
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AA seq
521 aa
AA seq
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MPMVIYTIIAGIVGLALGAIVVGLFLKKNNQKLEQEAQEKAKSILREAELNAESLKKDRM
LEAKEKYLKLKADFEEDVNKKKNILITNEGKLKQREQILSKEMEQIKRKEAELDSKKENL
SAQLHAVQVKKDELDRVTNQRIADLEKVALLTKEEARDQLVVMLKDEAHTKASSHIKDIL
DQAKLSATKQAKKIVLDTIQRTATEHAVENCVSIFNIESDDIKGKIIGREGRNIRALESA
TGVEIVVDDTPEAIIISGFDPVRREIARLSLHRLVQDGRIHPARIEEVVAKTEKNIEEEI
VEIGERTCIDLGVHGLHPELIRMVGRMRFRSSYGQNLLQHSREVAKLCATMAAEMGLNAK
LAKRAGLLHDIGKVYPEEAELPHAILGMELAKKYKEHPEVCNAIGAHHDEIEMTSMISPI
VQASDAISGSRPGARREIMDSYIKRLKDLEDLALSFDGVNKCFAMQAGRELRVLVDAENV
DDTTAGKLSFDISQKIEKEMQYPGQIKVTVIREMRAVNYAK
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atacctatggtaatatacacaataattgccggcatagtcggcctggcattaggggcaata
gtggttggtcttttccttaagaaaaacaatcagaaactagaacaagaggcacaagagaaa
gcgaaaagcatcctcagagaggctgagctgaatgccgaatccctcaaaaaggatcggatg
ctggaagccaaggagaaataccttaagctaaaagctgatttcgaagaggatgtgaataag
aagaagaacattcttatcaccaatgaaggcaagctcaagcaacgtgagcaaattctctcc
aaagagatggagcagatcaagcggaaagaagccgaacttgatagtaaaaaagaaaatctc
agtgcccagctacatgctgtacaggtcaagaaggatgaactggacagggtaaccaatcag
cgtatcgcagacttggaaaaagtggcgctactgaccaaggaagaagcgcgtgatcagttg
gtagtgatgctgaaagatgaggcacataccaaggcttcctcgcacatcaaggatatcctc
gaccaagcgaaactctcggccaccaagcaagccaagaagattgttctggataccattcag
agaacagctacagagcatgccgtagaaaactgcgtttctatctttaatatcgaaagtgat
gatataaaaggtaagatcatcggtagggaagggcgaaatatccgggcgctggagtcggcc
acaggtgtggaaatcgtagtggatgatacccctgaggcaattattatctctggctttgat
ccagtcagaagagagattgcgagattgtcgctgcatagattggttcaggatggaaggatt
cacccggcccgtatcgaagaagtagtggcgaagaccgaaaagaatattgaagaggagatt
gtggagatcggtgaaagaacttgtattgaccttggagtgcatggccttcatccggaattg
ataaggatggtcggtaggatgcgcttccgttcttcctatggacagaatctattgcaacac
tccagggaagtggccaagctatgtgctaccatggccgctgagatggggcttaatgccaag
cttgccaaaagagccggactgctccatgatatcggaaaggtttatccagaggaagcagaa
cttcctcatgccatcttgggcatggagctggccaagaagtataaagagcatccagaggtg
tgcaatgccatcggcgctcaccacgatgagatagaaatgacatccatgatctctccgatt
gtccaagcttccgatgccatttccggttcgcggccaggagccagaagggaaattatggac
agttatatcaagcgtctgaaagacttggaggatttggcattgagctttgatggagtgaac
aaatgttttgccatgcaggcaggacgtgagcttagggtcttagtggatgctgaaaatgtt
gatgatactacggcaggaaagctttcttttgatatctcccagaagatcgaaaaggaaatg
cagtatcccgggcagataaaagtaacggtgatcagggaaatgcgagctgtcaattacgct
aaataa
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