Echinicola soli: FKX85_01670
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Entry
FKX85_01670 CDS
T06084
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
echi
Echinicola soli
Pathway
echi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
echi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FKX85_01670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
echi03019
]
FKX85_01670
03400 DNA repair and recombination proteins [BR:
echi03400
]
FKX85_01670
Enzymes [BR:
echi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FKX85_01670
Messenger RNA biogenesis [BR:
echi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FKX85_01670
DNA repair and recombination proteins [BR:
echi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FKX85_01670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HEM4
Ribosomal_L5
zf-CXXC
ATP-synt_DE
Motif
Other DBs
NCBI-ProteinID:
QDH77821
UniProt:
A0A514CDC6
LinkDB
All DBs
Position
complement(361791..363710)
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AA seq
639 aa
AA seq
DB search
MKTKALSVLKKVFGYDDFRPMQLDIVLSVASGKDTLALLPTGGGKSICFQVPALMQEGIC
IVVSPLIALMKDQVDNLRKRGVLATAIYSGMRKREIDTTLDNCIYGNYKFLYVSPERLKS
DLFIERFKRMKVSMVAIDEAHCISQWGYDFRPPYLEIAALREYHPKVPFIALTASATMQV
KADIMEKLELKDPAVFVKSFSRKNLSYAVRKAENKLEKAIEILQKVSGSAIVYVRSRKAT
KELAQALYRLGVSATFYHAGLEKALREQRQMDWKNNKVRVIVATNAFGMGIDKPDVRIVI
HVDLPENLENYYQEAGRAGRDEWKAFAVLIYHDKDLDVLVERAEQSYPPIDFIKRVYQSL
ANYYRIAVGSSLMVSYDFDITAFTNTYNLDLLLTYNALKILQGEALVELSEGYYSPSTFH
FLIGQSRLYEYQIAHAALDPVIKVLLRMYGGELFSEYLKIREDKLASVLNIPEKEVVKLL
ERMDNLDIAAYNKKKDQPQVTFLTHRHDAGRLPLNTKRIAERRDTSVEKAKAMVGYVTNF
QTCRTQQLLAYFGEVTDEQCGVCDVCLERKKAANAPSYLEQAREKLIQTLADGDAFTYQE
LLAKAKLSTTDEYAVNLLRTMEDEGQIVSLADGRIKINN
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
ttgaagacaaaggcgctttcggtattgaaaaaggtgtttgggtatgatgatttcagaccc
atgcagctggatattgtcctttcggtagcgtctgggaaggatacattggcgcttttgccc
acaggcggagggaaatccatttgcttccaagtgcctgcattgatgcaggaaggaatctgc
attgtcgttagtcccttgatagccctgatgaaagaccaagtggataatttgcggaagcgg
ggagtgctggccacggccatttactcaggcatgcgaaaaagggagattgacactacgctg
gacaactgtatctatggcaattataagtttctttatgtctcgcctgagcgattgaaatcg
gacctgttcatcgagcggtttaagcgcatgaaagtcagtatggtggccattgacgaggcc
cattgtatttcccaatgggggtatgatttcaggcctccttatttggaaattgccgcactg
cgggaatatcatcctaaggtgccttttattgccctcactgcctcagcgaccatgcaggtc
aaggcagatatcatggaaaagttggagttaaaggatcctgcagtttttgtaaagtccttt
tcccgaaagaacctgtcttatgctgttcgtaaagccgagaacaagcttgaaaaagccatt
gaaatcctgcaaaaagtaagtggctcggccatcgtgtatgtaagaagcaggaaggccacc
aaagagctggcccaagcgctatatcggttaggggtttcggcaactttttatcacgcaggt
ctggaaaaagcactgcgggaacagcgacagatggattggaaaaataacaaagtgagggta
atagtcgctaccaatgccttcggtatggggattgacaagccggatgtacgtatcgttatc
catgtggatttgccagaaaacctggagaactattaccaggaagccggaagggcggggcgt
gatgaatggaaggcctttgcggtactgatttaccatgacaaggacctcgatgttttggtg
gagcgagcagagcaatcctatcctcccattgactttatcaagcgggtataccaaagcctt
gccaattattaccgcattgcagtaggcagtagtctgatggtgagttatgactttgatatc
actgcttttaccaatacctataacctggatttgctgttgacatacaatgcactaaaaatc
ctccagggagaagcgttggtagagcttagtgaggggtattatagtccaagtacgtttcat
tttctcatcggtcagagccggttatatgaatatcagattgctcatgcggccttggatcca
gtgatcaaggtactgttgaggatgtatggaggggaactcttttccgagtacctgaagatt
cgggaagataagctcgccagcgtgctcaatattccggaaaaagaagtggtaaaactgctg
gaacggatggataatctggacattgcggcctataataagaaaaaagaccagccacaagtg
acctttttgacccatcggcatgatgcgggacgccttcccttgaataccaagcggatcgcc
gaacgaagggacaccagtgtggaaaaagccaaggccatggtcggctacgtgaccaatttc
caaacatgccgcacccaacagctgctagcctatttcggagaagtgaccgacgagcaatgt
ggcgtgtgtgatgtatgcctggaaagaaagaaggcagcaaatgcaccaagctacctggaa
caggcgagagagaagcttattcaaactttagcggatggagatgcgtttacctatcaggag
ctacttgccaaagcgaaattatccacaactgatgaatacgctgtcaaccttttgaggacg
atggaagatgaaggccaaatcgtgagtttggctgacggcaggataaaaatcaataactga
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