Echinicola soli: FKX85_03555
Help
Entry
FKX85_03555 CDS
T06084
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
echi
Echinicola soli
Pathway
echi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
echi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FKX85_03555 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
echi03019
]
FKX85_03555 (recQ)
03400 DNA repair and recombination proteins [BR:
echi03400
]
FKX85_03555 (recQ)
Enzymes [BR:
echi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FKX85_03555 (recQ)
Messenger RNA biogenesis [BR:
echi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FKX85_03555 (recQ)
DNA repair and recombination proteins [BR:
echi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FKX85_03555 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
HTH_40
Helicase_C
RecQ_Zn_bind
HRDC
Helicase_Sgs1
GerE
ResIII
Motif
Other DBs
NCBI-ProteinID:
QDH78163
UniProt:
A0A514CEB7
LinkDB
All DBs
Position
839445..841571
Genome browser
AA seq
708 aa
AA seq
DB search
MITPKEVLKNFYGYDSFRGQQEAIIQSILKKQDTIVLMPTGGGKSVCYQIPAMVNEGLTL
VISPLIALMKDQVDALNGIGIAAAYLNSSQSTSEQRFVSEEIKSGKLKLLYVAPERLFGG
VFPLTETLKTTPISLVAIDEAHCVSQWGHDFRPDYLMIGRLRQELPSVPFAALTATADKQ
TRADIADKLGLKNPKWFISSFDRPNITYRIVPKRNSFDKLLGFLEYHHKNSGIIYCLSRK
NVEDMADRLQAAGLSALPYHAGLDRQTRAKHQEKFIKDEVKIMVATIAFGMGIDKSNVRF
VVHMNMPQNVEGYYQETGRAGRDGLPSDALLFYSYADVMTLQRMIDTPENPDYSEVMLAK
LDKMKHFCQSTTCRRRYLLGYFDEEEKKDCGNCDRCLSKGNKQDMTMPSQMLLSAIVRLK
ESYGLGYCILVLRGSKSAKVQEDHKALSVYGVGKDKSEDFWKKLGQHLQQEGYLAEAGTQ
FPTLKLTTTAWEKLKSREKFLLNMEEGALEHQKRSTPYEETLFEELKRIRFGLAQKENVP
PYVIFSDNTLVEMATYLPQDHDSFLQMSGVGQLKAENYENHFIPVIKAYTEENQLKPRKK
LSASKSSKSNSTGISKTELVTLQYLKDGLNIFEIAKAREMSLTTIEGHIAKLVKMKKLDA
EKFMSKDDLLNIRLFYRRQEGRFLKPIKEHFGDRYSYFQIKVAIAEEQ
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgattaccccaaaggaagtactgaagaatttttatggatacgatagttttcgcggtcag
caagaggccattatccagagcattttaaaaaaacaggatactattgtcctgatgcctacc
ggtgggggaaaatccgtttgctatcaaatcccagccatggtcaatgagggccttacactg
gtcatctccccgttgattgcgctgatgaaggaccaagtggacgcattaaatggcattggc
atcgccgcggcttacctgaattcttcgcagagcaccagcgaacagcgctttgtatccgaa
gagatcaagtcgggcaagctgaaactcctgtatgtagccccagaaagactctttggtggt
gttttcccactgactgagaccctaaagacgactcctatttccctggtggccattgatgag
gcacactgtgtctcgcagtgggggcatgatttcaggcctgattacctgatgatcggtcgg
ctgagacaggagcttccttctgtaccctttgctgcactcactgccaccgcagacaaacag
acccgggctgacatcgctgataagttagggctaaaaaatccaaaatggttcatctccagc
ttcgacagaccaaacatcacctaccgcattgtacccaaaagaaactcatttgacaagctt
ttggggtttctggaataccaccacaaaaattccggcatcatctactgcctgtccagaaaa
aacgtcgaggacatggctgatcggctgcaagcagcgggcctctcggccttgccctaccat
gctggcctcgacagacagacccgggcaaagcaccaagaaaaattcatcaaagacgaagta
aagatcatggtggccaccattgcctttggcatggggatcgacaaatccaatgtgcggttt
gtggtacacatgaacatgccgcaaaacgtcgagggctactatcaggaaacagggcgtgcc
ggccgggatggccttcccagtgatgcgctgctcttttacagctatgccgatgtcatgacg
ctccagcgcatgatcgatacgcctgagaaccctgattactcagaagtaatgcttgccaag
ctggataagatgaagcacttctgccagtccaccacctgtcgcaggcgctatctgctgggc
tattttgatgaagaagaaaaaaaagactgtggcaattgcgatcgctgtctgagcaaaggc
aacaaacaagacatgaccatgccttcccagatgttactgtccgctatcgtccggcttaaa
gaaagctatggccttggctattgcatactggtactgcgaggatcaaaatctgccaaagtc
caagaagaccacaaagccctatcggtctatggcgtgggcaaagacaaatcagaagatttt
tggaaaaagctgggccagcacctccaacaggaagggtatttggcagaagccggcacacag
tttcccaccttaaaactcactaccaccgcttgggaaaaattgaaaagccgagaaaaattc
cttctcaacatggaagagggagcgctagagcatcaaaagagaagtacgccttatgaagaa
acactttttgaggagctgaagcgtatccgttttggtctagcccagaaggaaaacgtaccg
ccttatgtgatattctctgacaatacccttgtggaaatggccacctatttaccgcaagac
catgacagctttttgcaaatgtccggtgtgggccagctaaaagccgaaaactatgaaaat
catttcattccagtgatcaaggcctatacggaagagaaccaactcaagcccagaaaaaaa
ctctctgccagtaaatcctcgaagtccaacagcaccggcatctccaagacagaactggtg
accctacaataccttaaagatgggttgaacatatttgaaattgccaaggcaagggaaatg
agtcttaccaccatcgaagggcatattgccaaattggtaaagatgaaaaaactggacgcc
gagaagtttatgtcaaaggacgacctgctgaacatccgattattctatagaaggcaagag
ggtcggtttctaaaaccaataaaagaacattttggtgaccgctattcatacttccagata
aaagtcgccattgctgaggaacagtaa
DBGET
integrated database retrieval system
