Echinicola soli: FKX85_09625
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Entry
FKX85_09625 CDS
T06084
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
echi
Echinicola soli
Pathway
echi03030
DNA replication
echi03430
Mismatch repair
echi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
echi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FKX85_09625 (dnaE)
03430 Mismatch repair
FKX85_09625 (dnaE)
03440 Homologous recombination
FKX85_09625 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
echi03032
]
FKX85_09625 (dnaE)
03400 DNA repair and recombination proteins [BR:
echi03400
]
FKX85_09625 (dnaE)
Enzymes [BR:
echi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FKX85_09625 (dnaE)
DNA replication proteins [BR:
echi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FKX85_09625 (dnaE)
DNA repair and recombination proteins [BR:
echi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FKX85_09625 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
QDH79278
UniProt:
A0A514CHI5
LinkDB
All DBs
Position
complement(2369987..2374273)
Genome browser
AA seq
1428 aa
AA seq
DB search
MYIIFDTETTGLPRNYNAPITDLDNWPRLVQLAWQLHDERGKLISHQNYIVKPEGFTIPY
NAEKVHGISTDRALKEGHDLKEVLEIFHKDVEKANYLVGHNIGFDINVCGAEFLRVDLPM
QLLEKQELDTKDISTNFCAIPGGKGGKYKWPTLTELHQKLFGAGFEDAHDAAYDVDATAK
CFFGLITAKVQAPEEGIAVEEVIYEPPKLDAANFAAAKDQQKEAAQDIIKQARKADISDL
VDIPFSHLHVHTQYSILQATSEIPAMVARAKEFNMPAIAMTDHGNMMAAFHFVKEAMSND
IKPVVGCEFNICREHQNKSQKDDGFQAVLLAKNKTGYHNLAKLASFAYTQGFYYVPRIDK
ELLVQYKGDIIATTGGLWGEIPFLILNVGETQAEEAFLWWKEQFGEDFYVELNRHGIPEE
EKVNEVLLRFAQKYNVKYFAANNTYYNTKNDAKAHDILLCVKDGEKVDKPKKYIGKKGRE
FRYGFPNEEFYIKTPEEMKKLFADLPEAIECTNEIIEKVEAYKLAREVLLPKFNIPERFQ
DPQDDEDGGKRGENAYLRHLTYEGAKKRYPEITEEIRERLDFELSIIANTGYPGYFLIVQ
DFTTAAREMGVSVGPGRGSAAGSAVAYCIGITNVDPVAYDLLFERFLNPDRVSLPDIDID
FDDHGRQKVIDYVIEKYGANQVAQIITYGTMAAKSAIRDTARALDLPLSDADRLAKLVPD
IKLKALFSLANDRAKLADKLKNNSENIDKAYELINISKGNDDLSKTINQAKILEGSVRNT
GIHACGVIITPDDITNFVPVALAKDSDMYCTQFDNSVVENAGLLKMDFLGLKTLTLIKDA
IRIVKERHDVELDPENFPIDDTETYELFQRGETVGIFQYESPGMQKYMRELKPTVFADLI
AMNALYRPGPLEYIPSFIKRKHGLEPIAYDLDDMEEYLQETYGITVYQEQVMLLSQKLAG
FTKGEADVLRKAMGKKLRDVLDKMKPKFVNQAAEKGHDKTKLEKIWKDWEAFASYAFNKS
HSTCYAWIAYQTAYLKAHYPAEYMASVLSNNMNDITQVTFFMEECKRMGIEVLGPDVNES
KDGFTVNQEGQIRFGLAAIKGAGGAAVHSVIEERAENGPYKNIFDFTQRINLRSVNKKTL
ESLAMAGGFDCFPDHHRRQYLEASENDATLIEKAVKYAQKKAQEAESSQVSLFGGGSGME
VPMPSITPIEPFSQLQQLNIEKEVVGLYISGHPLDQFKVEFDSFTNTPLSEFSNTDVLKA
KGEIKAAGVVTSFAHRTTKNGNPFGTLTLEDYNGGHTFFLFGEDYIKYKEYFMTGWFLYF
TGSVQGKRWNPDELEFKIGNIMLLNEVRGRMVKGLRLNISLDDLTLDLMERLEAITSKYK
GEAKLFINVTDVKERIAVDLRSTKFLIDPSQDMIKELEDIPEVQYKII
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgtacattatttttgataccgaaaccactggtttaccgagaaattacaatgcccccatc
accgatttggacaactggccacggctggtccagctggcttggcaactccacgatgagcgg
ggcaaactgatttcccatcaaaactacattgtcaaacccgaaggcttcaccattccttac
aatgccgaaaaagtccatggaatctccacagaccgtgcattaaaagaaggccatgacctg
aaggaggtattggagattttccacaaagatgtagaaaaagccaactacctggtcggccac
aatattggttttgacatcaatgtctgtggtgcggaatttttgagagtggacctgccaatg
cagttgcttgaaaagcaggaattggacaccaaggacatatccactaatttctgcgccatt
cctggagggaaaggaggcaaatacaaatggccaacgctaacagaactccatcaaaaactc
tttggtgcgggattcgaggacgcccacgatgctgcttatgacgtagacgccacagcgaag
tgtttctttggactgatcaccgccaaagtacaggctccagaagaaggcattgcagtagaa
gaggtcatttatgaaccgccaaaactcgacgctgccaactttgccgctgccaaggaccaa
caaaaggaagctgcccaagatatcatcaagcaagcgcgaaaagcggatatcagtgacttg
gtagacatcccattcagtcacctccatgtccatacgcaatactccatcctgcaggctacc
tcagaaatccctgctatggtggccagggccaaggaattcaacatgccggccattgccatg
actgaccatggcaatatgatggctgctttccattttgtgaaagaagctatgtcaaatgac
atcaagccagtggtgggttgtgagtttaacatttgtcgggaacatcaaaacaagtcccaa
aaggacgatggcttccaggcggtgttgcttgccaaaaacaagacgggctatcacaactta
gccaaattggcctcatttgcctacacccaaggtttttattatgtccccaggatcgataag
gaactcctggttcagtacaaaggagatatcattgccaccactggcggactttggggggag
attcctttccttatcctgaatgtcggtgagacccaagctgaagaagcctttttatggtgg
aaggagcagtttggagaggatttttacgtggaattgaaccgtcacggaatcccggaagag
gaaaaagtaaacgaagtcctgcttcgattcgcccaaaagtacaacgtcaagtattttgcc
gccaacaacacctactataacaccaagaatgacgccaaggcgcacgacattctcctctgt
gtcaaagacggtgagaaagtcgacaagccgaaaaagtacattggcaaaaaaggccgggaa
ttccgctacggcttccccaacgaagagttctatatcaaaacgcccgaggagatgaaaaag
ctctttgctgatctccctgaagccatcgaatgtactaatgaaatcatcgaaaaagtagag
gcctacaaactggcaagggaagttttgctgcccaagttcaatattccagaacggtttcaa
gacccacaagatgatgaagacggcggcaagcgtggcgaaaacgcctatttgcgccacctt
acctacgaaggagccaagaaacgctatcctgagatcactgaagaaatcagggaacggctg
gattttgagctctctattattgcgaacaccgggtatccggggtatttcctgatcgtgcag
gattttaccacggccgcccgggaaatgggtgtatccgtagggcctggcagggggtctgcc
gccggctctgcagtcgcctactgcatcggcattaccaatgtggatccagtcgcatatgac
ctcctttttgagagattcctaaacccggacagggtttcacttcccgatattgatattgac
tttgatgaccacggtcgtcaaaaagtaatcgattatgtaatcgaaaaatatggtgccaat
caggtggcacagatcatcacttacggtaccatggcggccaaatcggccattcgcgataca
gcgagggcacttgacctgccattgtcagacgcagatcgcctggccaaattggtcccagac
atcaagctgaaagccctctttagcctggccaatgaccgggccaaactcgccgacaagctc
aaaaacaactcagagaacatcgataaggcctacgagctgatcaacatctccaagggcaac
gacgacctgtccaagaccatcaaccaggcaaagatactggaaggatccgtacgaaacaca
ggcatccacgcctgtggggtcatcatcactccggatgacattaccaattttgtccctgta
gcacttgccaaagactcggacatgtactgcacacaatttgacaactccgtggtggaaaat
gcaggcctgctgaaaatggactttcttggcctgaaaaccctcacgctgatcaaagacgcc
attcgcatcgtcaaggagcgtcatgatgtggagctggatccggaaaacttccccattgat
gatacagaaacttatgagctctttcagcgtggtgaaacggtagggatatttcaatatgaa
tcccctggcatgcagaaatacatgcgtgagctgaaacccacggtatttgccgacttgatt
gccatgaatgcgctctatcgtccgggacctttggaatacatccccagctttattaaaaga
aagcacgggctggaacccattgcttacgatctggacgatatggaggaatatcttcaggag
acttatgggattacagtgtatcaggaacaggtgatgttactttcccaaaaactggcaggt
tttaccaaaggcgaggcagatgtcctgcgtaaggccatgggtaaaaagctccgtgacgtc
ctggacaaaatgaagcctaaatttgtcaaccaagccgctgaaaagggccacgacaaaacc
aagctagaaaagatatggaaggactgggaagcctttgcctcttatgcctttaacaagtcc
cactccacctgttatgcatggatagcgtatcaaacagcctatctcaaagcacattaccct
gccgaatacatggcttccgtgctgagcaacaacatgaatgacatcacccaggtcaccttt
ttcatggaagaatgtaaacgcatggggatagaagtactggggcctgatgtcaatgagtcc
aaagatggctttacggtaaaccaagaaggacaaattcgatttggtttagcggccattaaa
ggtgcgggtggtgcggctgttcactcagtaatcgaagaacgggcagaaaatggcccctat
aaaaacatatttgattttacccagcgcataaacctacggtcggtcaataaaaaaacgctg
gaatcactggccatggccggaggttttgactgtttccctgatcatcacagacggcaatac
ctggaagcttccgaaaatgatgccacgctcatcgaaaaagcagtaaaatatgcccaaaag
aaggcccaggaagctgaaagctcgcaagtatcccttttcggaggaggttcaggaatggag
gtccccatgccaagcattacccctatagagcctttcagccaattgcagcaactaaacatc
gagaaggaagtagtcggactttacatctctgggcaccccttggatcagtttaaggtagag
tttgattcttttaccaatacgcccttatcggaattctccaataccgatgtcctgaaagcc
aaaggtgaaatcaaagcagctggagtagtaacatcctttgcccatcgtaccaccaaaaac
ggcaatcccttcggtacattgaccctagaggattataacgggggccataccttctttcta
tttggtgaagattacatcaaatacaaagagtatttcatgactggatggttcttatacttc
actggaagtgttcaaggcaaacgctggaacccggacgaactggaatttaaaataggcaac
atcatgctactaaatgaggttcgaggcagaatggtcaaaggcttgcgcctaaacattagc
ctcgacgaccttaccctggacttaatggaaagattggaagccattacttccaagtacaaa
ggagaagccaaactctttatcaatgtcaccgatgtcaaggagcgaattgcagtggaccta
aggtccaccaagtttctgatagacccttctcaagacatgattaaagaattggaagacatc
ccggaagtacaatacaaaatcatttaa
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