Echinicola soli: FKX85_14965
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Entry
FKX85_14965 CDS
T06084
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
echi
Echinicola soli
Brite
KEGG Orthology (KO) [BR:
echi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
echi03032
]
FKX85_14965 (topA)
03400 DNA repair and recombination proteins [BR:
echi03400
]
FKX85_14965 (topA)
Enzymes [BR:
echi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FKX85_14965 (topA)
DNA replication proteins [BR:
echi03032
]
Prokaryotic type
DNA Topoisomerases
FKX85_14965 (topA)
DNA repair and recombination proteins [BR:
echi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FKX85_14965 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
O-FucT
EF_EFCAB10_C
DRC7_C
Motif
Other DBs
NCBI-ProteinID:
QDH80266
UniProt:
A0A514CKC2
LinkDB
All DBs
Position
complement(3788017..3790338)
Genome browser
AA seq
773 aa
AA seq
DB search
MPKNLVIVESPAKAKTIEGYLGKDYKVTSSYGHVRDLPKGDKAIDIKNHFKPTYEVTSDK
KEVIKQLKKMVKDSDTIYLASDDDREGEAISWHLKEVLKLDSDKTKRIVFREITKNAITK
AIENPRNIDIDLVNAQQARRILDRLVGFELSPVLWKKVKAGLSAGRVQSVAVRFIVERER
EIDKFEFKSSYKVTAIFNVKGKELNAELPRKFETQEEAEEFLKVCLEASFSIKNLEKKPA
KKTPAAPFTTSTLQQEASRKLSFSVAQTMTLAQRLYEAGKITYMRTDSVNLSQEAMESAQ
NQIMSAFGPEYHKSRKYTSKSEGAQEAHEAIRPTDFANEEISGERNEQRLYELIWKRAIA
SQMADAQLEKTLVTIGISNSDLTLSASGEVIKFEGFLKVYLESTDDEDEEESNENRGLLP
PLTIGQDLDLTEMKSRQSFTRPPARYTEASLVKKLEEMGIGRPSTYAPTISTIQKRNYVI
KESRDGKPRDYIEMVIKDGAFSKAEKTEHYGSDKNKLFPTNIAMVVNDFLVEHFPNVIDY
KFTAKVEKEFDDIAQGIQQWDNMIGNFYGKFHNTVEEAETVERANVSSSRELGKDPKTGK
PVIARLGKFGPLVQIGDQDDEEKQFASLKKGQFIENITLEDAMELFKLPRDVGMFEDKKI
VAAIGRFGPYIRHDGKFVSLGKEYDPLSVNESEAIQLIKDKREADAKKHIKTFDENPDIQ
ILNGRWGPYIKFAKKNYKIPKDKVAEDLNYEETIEIIENQPEKKKGRFAKKKK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaaatctagtcattgtcgaatctcctgccaaagccaaaacaatcgaaggctat
cttggtaaggactataaagtaacttccagctacggacatgtcagggaccttcccaaagga
gacaaggctatagatataaaaaaccacttcaaaccaacctatgaggtaacttcagataag
aaagaagtcatcaaacagctaaagaaaatggtaaaggattctgacaccatctatctggca
agtgatgatgaccgtgaaggagaagctatttcatggcatttgaaagaggtgctaaaactc
gatagtgataaaaccaagcggattgtctttagagaaatcacaaaaaatgccatcaccaaa
gcgatcgaaaaccccagaaatatagacatcgatctggtcaatgcccagcaggccaggagg
attctggacaggctcgtgggttttgaactatcgcctgtgctatggaaaaaagtaaaagcc
gggctctcggcaggtagggtacagtcagttgcagtgaggtttattgtggaaagagaacgg
gaaatcgataaattcgagttcaaatcctcctacaaggttacggctatatttaatgtcaaa
ggcaaagaactgaacgcagaacttccaaggaagtttgaaacccaggaagaagcagaagaa
tttctgaaagtttgtcttgaggcaagtttttccatcaagaaccttgagaaaaaacctgcc
aaaaagactccagcagcaccctttaccacatctacactacagcaagaagccagtaggaaa
ttgagcttttcagtggcccagaccatgaccttggcccaacggctgtatgaagccggtaaa
atcacctatatgaggacagacagtgttaacttgtcccaagaagccatggaaagtgcccaa
aaccagatcatgtctgcttttggtccagaatatcataaatcgcgaaaatacacttcaaag
tcagaaggtgcccaggaagcgcacgaagccatccgccctactgattttgccaatgaagaa
atctccggagagagaaatgagcagcgtctctatgaattgatctggaaacgggccatcgcc
tcacagatggctgatgcccaactagagaaaacactagtgaccatcggcatcagcaattca
gacctcacccttagtgccagcggtgaggtgatcaaatttgagggattcctgaaggtctat
ttggaaagcacagatgatgaagacgaagaggaaagcaatgaaaatagagggctattgcct
cctttgaccattggtcaagaccttgatctgaccgagatgaagtcccgccaaagcttcacc
aggccaccggctcgttacacagaagcttctctggtgaagaaattggaagaaatgggcatt
ggccgtccatccacctatgcccctaccatttctaccatccaaaaacgtaattatgtcatc
aaagaatcccgtgatggcaaaccaagggattatatcgaaatggtgattaaggacggtgca
tttagcaaagctgaaaaaacagagcactacggctcagataagaacaaactcttccctacc
aatatagccatggtggtgaatgacttcttggtggaacatttccccaatgtcattgattat
aaattcactgcaaaagtagaaaaggagtttgatgatatcgcccagggtatccagcagtgg
gacaatatgatcgggaatttctacggcaagtttcataacaccgtagaagaagccgaaacc
gttgaacgtgccaatgtcagctcttccagagagctgggcaaagaccccaaaaccggcaag
ccagtaattgcacggttgggcaaattcggtccgctcgtacagatcggtgatcaagatgat
gaagagaagcaatttgcaagtcttaaaaaaggacagtttatcgaaaacatcaccttggaa
gatgccatggagctgtttaaattaccacgggatgtcggaatgtttgaagacaaaaaaatt
gttgcggctatcggacgattcggcccctatatccgccatgacgggaaatttgtttccttg
ggaaaagaatacgacccattaagtgtcaatgaatcggaagctatccaactcattaaggac
aaaagagaggcggatgccaaaaagcacattaagacatttgacgaaaatccagacatccaa
atccttaatggacgctgggggccttatatcaaatttgccaaaaagaactataaaatcccc
aaggataaagtagcagaagacctcaactatgaagagaccatagagatcatagaaaaccag
ccggagaagaaaaaaggcaggtttgccaaaaagaaaaagtaa
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