Echinicola soli: FKX85_15485
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Entry
FKX85_15485 CDS
T06084
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
echi
Echinicola soli
Pathway
echi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
echi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FKX85_15485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
echi03021
]
FKX85_15485
Transcription machinery [BR:
echi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FKX85_15485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
GerE
Sigma70_r4
HTH_23
HTH_11
HTH_40
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QDH80363
UniProt:
A0A514CKK7
LinkDB
All DBs
Position
complement(3939803..3940381)
Genome browser
AA seq
192 aa
AA seq
DB search
MFDQKQYIESSKFIDLLQKDGVKAFELLFKLYYDKLLHLAKYYTNNAEDAEEIVQDVFLK
LWEGRKKITKLNNSYLFTMTKNGCLDYLKHQSIVLKKSKELYDNQLADPLRFIQNETASY
ILEKELDQKIQESIAALPTKQREVFVKSRMDGKKNMEIAQELKISKRTVDTHITLALKAM
RLQLKEFLMLML
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgatcaaaaacaatatattgaatccagcaaattcattgaccttttgcagaaagac
ggggtcaaggctttcgagttgcttttcaagctatattatgacaaactccttcacttggca
aagtactataccaataacgctgaagatgcagaggaaatcgttcaggatgtatttttaaag
ctttgggaaggaagaaaaaagatcaccaagctgaacaacagctacctttttaccatgacc
aaaaatggctgtttggattatttaaaacatcaatcgatcgtcttgaagaaatcaaaggaa
ctctatgacaatcaattagccgatccgctacgatttattcaaaatgaaacggcttcctat
attttagaaaaggaacttgatcagaaaattcaggaaagtatcgctgcgctccccactaaa
caacgagaagtatttgtaaaaagcaggatggatggcaaaaaaaacatggaaattgcccaa
gaattaaaaatttccaagaggactgtcgacacccatatcaccctagcactaaaggccatg
cgtttgcaattaaaagaatttttgatgctgatgctgtag
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