Echinicola soli: FKX85_18925
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Entry
FKX85_18925 CDS
T06084
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K03701
excinuclease ABC subunit A
Organism
echi
Echinicola soli
Pathway
echi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
echi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FKX85_18925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
echi03400
]
FKX85_18925
DNA repair and recombination proteins [BR:
echi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FKX85_18925
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FKX85_18925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
DnaJ_CXXCXGXG
AAA_16
AAA_29
nSTAND1
AAA_25
AAA_22
RsgA_GTPase
AAA_33
ATPase
ATPase_2
NB-ARC
NACHT
Anti-TRAP
NTPase_1
RapZ-like_N
Motif
Other DBs
NCBI-ProteinID:
QDH81004
UniProt:
A0A514CMS2
LinkDB
All DBs
Position
complement(4857224..4861711)
Genome browser
AA seq
1495 aa
AA seq
DB search
MRITNAYQNNLKNVSLDIPENQLIVVTGLSGSGKSSLAMGVIANEGYRYFLESLPAYNQQ
NAQAIPTAEVDSIADLPPVIKVEQSKRFQSISATFGTLSELTPLFRVLFARFAGEETMSK
SLFSFNHPKGACDNCRGIGEAEYIDIDKLVGDENKTLREGAITTTLPNGYIVYSQVTVEE
LNKVCAAHGFSVDIPWKELSPEQQEVILYGSNRIKVYYGKHSLESRLRWEGFKAKPREEG
YYRGIIPIMSDILRLDRNVSILRFVSSKICPTCQGARIKPEHLKYRWKGLNFREWMDLPL
QQLYDRLQAQSLFGGEKVLVDKLCTQLLDLIRLGMEHYQLSTSSMDISSGDGQRIKLIKQ
VNSNLQGILYVFDEPSIGLPSAYQQHLRHIFDRLINRGNTVMVVEHDLHFIRSADWIVEL
GPKAGIEGGKIIFNGITRKFLQAKGLESPTLTAIQDAGNQAKKQVAHKRVANFQPEAKTL
SVVSRKTSAVLERISTYGEEHDLNLLTVTDQPIGKTPRSNPSTYTGLADKIRDLLAKTPE
AKALKLAKGAFSFNNKTGRCSNCEGAGVITLSMSVMGNINQVCPVCQGKRFTPDVLKVHW
NSKNIAEIYDLSIKEAADFFAEEKKLAEILALMLQLGLGYIKLGQPSNTLSGGEAQRIKL
TKHFAKPSKKTVLLLEEPSIGLHQQNVQQLMDALNQLKEQTAGIVCFENHPLFQSECDIL
VDNALRPQLSEDKLPPVQDQDVIAIRGARTHALKDISLEFPKGYLSVVTGISGSGKSSLV
IDTLHGYGLQEMTKQFSSYQQSRVGVNFQLEVDYIEGLTPSICITRKERNFSERSDIAQQ
TDFDKTLRFAFSRKAQYTGLEWSASHFSSNHELGKCVVCDGMGQELLPDLDKIVLDENLS
IAEGLFEHHKSLAYYGQASGQYMAILGEVGREYGFDLTTPFRELTAVQKEVVFKGVEERT
WEATWKFKTKTREGTQQVKMKWSGLFKYLMDEYFLTRKNKYQPLKALLSYTKCSHCQGSG
LKPERLEVMIGGQSVHTLKSMDFRGLDRWLGASGATETIDRQLIESVRAHLANTLKRASQ
LHIDHLQLNRKSTTLSGGEQQRVALIKQLNSPLKGITYLLDEPSAGLSADNIPDLVHILK
ELVMKGNTVIVIEHNKEIIMAADNLVEIGPKAGKHGGYLTFDGSPEAFLKTPDCHPFLKQ
PTHPIALEAGEVAISLRHLARHTLVKEALEVPVGGITAVTGKSGIGKTTLVKDILIPSIV
QGHPVNCAAITCPKPYSGAQYFEPKKLYAHNSTLLVAYLDLLKDISKIFANETGLKAKDF
SYKNKSSQCPNCKGTGVVSTSLDVAANHIEKCELCHGRRYQAHLLEYQVGGLHIAEVLAL
SLTELQTWLADQDMASSRQQFVQQLEAIGLAHLSLEQTVKSLSSGEKQRLLLLNWLNGKT
QGQLLILDEPSTGLHYADIDLLFDILQNLSQANDILVIDHNPYLLEKIGVGVVIE
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattacgaacgcctaccaaaataacctcaagaacgtttcattggatattcccgaa
aatcagctgatcgtagtgaccggtttatcggggtcagggaaatcgtccttggccatgggg
gtgatagccaatgaaggatatcgatattttttggagagcctgccggcttataaccagcaa
aatgcacaagcgattcctaccgcagaggtggacagtatcgccgatttgcctccggtgatc
aaggtggagcagtccaagcgctttcagtccatcagtgctacgtttgggaccctttcggag
ttgacaccgctgtttcgggtgttgtttgcacgctttgcaggggaggagaccatgagcaag
tcgcttttttcttttaaccacccaaagggagcctgtgacaactgtcgtggcattggtgag
gcggagtacatcgatatcgataaattggtgggtgacgaaaacaaaactttgcgggaaggt
gccattaccaccaccttgcccaatggttacattgtctattcgcaggtaacggtggaggag
ttgaacaaggtgtgtgcggcacatggtttttcggtggatattccttggaaggagctcagc
cccgaacagcaggaagtgatcctttatgggagtaaccgcatcaaagtctattacggaaag
cacagtctggagtcgcgcctcaggtgggaaggattcaaggccaaaccacgcgaggaaggc
tattacagagggattattcccatcatgtccgatattctgagactcgataggaatgtcagc
atcttacgctttgtgagctccaaaatatgcccgacctgtcaaggagcacggataaaaccc
gagcacctgaagtatcgatggaagggattgaactttcgggagtggatggaccttccctta
cagcaattgtatgatcgccttcaagcacaatccttatttggtggggaaaaagtattggtc
gataagctgtgtacgcaactgctggaccttatccggctggggatggagcattaccagctg
agcacatccagcatggacatttcctcaggtgatggacagcgcataaaattgatcaagcag
gtcaatagcaacttgcaaggcatattatacgtttttgatgagccctcgataggtttgccg
tccgcttatcaacagcatcttcgccatatttttgatcgattgatcaacaggggaaatacc
gtgatggtggtggagcacgacctccattttatccgatcggcagattggatcgtggagctg
ggaccaaaggcaggaatagaagggggaaaaatcatttttaacggaatcacacggaaattt
ctacaagcaaaaggacttgaaagtccaacgttgactgcgattcaggatgctggtaatcag
gctaaaaagcaagtggcccacaagcgggtagctaactttcagcccgaggccaaaaccttg
tccgtggtcagtagaaaaacaagtgcggtactcgagcggatttccacttacggtgaagag
catgacctgaacttgcttacggtaaccgaccagccgatagggaaaacaccacgaagcaat
ccttccacctatactgggctggcggataaaattcgggatttgctggccaaaaccccagag
gcaaaagccttgaaattggcaaaaggtgctttttcatttaacaataaaaccggccgctgt
tccaactgtgagggagcgggggtgatcaccctctccatgagcgtgatgggaaatatcaat
caagtttgtcctgtctgtcaaggcaagcggtttacacccgatgtgctaaaagtacattgg
aatagtaaaaatattgcggagatctatgatttgagtatcaaggaagcagcagactttttt
gcagaagaaaagaaactggcggagatattggccttgatgctccagttgggactgggatac
attaagctggggcagccctccaataccttgtcaggcggtgaagcccaacgcattaagttg
accaagcattttgcgaagccctccaaaaagacagttttgctcttggaggaaccgagtata
gggctgcatcagcagaatgtccagcaattaatggatgccctgaaccagctaaaagagcaa
acggcggggattgtgtgtttcgaaaatcacccgcttttccaatccgaatgtgatatatta
gtggacaatgccttacgccctcagttgtccgaagacaagctgccaccggtacaggaccaa
gatgtcattgccatcagaggagcccgtacgcatgccctaaaagacatcagcttggaattc
cccaaggggtatttgtcggtggtcacggggatttccggttcgggaaaatcttccctggtc
attgatactttgcacggatatggcttgcaggaaatgaccaagcaattttcaagctatcag
caatcgagagtgggcgtgaattttcagttggaagtggattatatcgaaggccttaccccg
agtatttgcattacccgaaaggagaggaacttctccgagcgatcggacattgcccagcaa
acggattttgataaaaccttgcgttttgccttttccagaaaggcccaatacacgggactg
gaatggtcagcaagtcatttttccagtaaccatgaattggggaaatgcgtagtctgtgat
gggatggggcaggaattgctccccgatctcgataaaatcgtgttggatgaaaatttaagc
atcgctgaagggctgtttgagcatcacaaatccttggcttattatggccaggccagtgga
cagtacatggccattttgggagaagtcggaagggaatatggctttgatctgaccactcct
tttagggagttgactgctgttcaaaaggaggttgtgttcaagggagtggaagaaagaaca
tgggaggcgacctggaagtttaaaaccaaaacacgggaaggtacccagcaggtaaagatg
aagtggagcggtcttttcaagtacctgatggatgagtattttttgacccgaaagaacaaa
taccagccgctcaaagcactgctttcatacacaaagtgcagtcactgtcaggggagtggg
ctaaaacctgagcggcttgaagtaatgattggcggtcaatccgtccatacactgaaatcc
atggatttcagaggtcttgaccgctggttaggtgcatcaggggctactgaaaccattgac
cgacagctgatcgaaagcgttagggcgcatttggccaatacacttaaacgggcaagccaa
ttgcatatcgaccatcttcaactcaaccgaaagtcgactaccttgagcgggggagagcag
cagcgagtggccctgatcaagcagctcaacagtccgctaaagggcattacctatttgctg
gatgagccttctgcgggcttatcggcggataatattcccgacttagtacatattttgaag
gaattggtgatgaagggaaatacagtaatcgtgatcgagcacaacaaagaaatcataatg
gctgcagataatttggtggagattggcccgaaagccgggaagcatggtggctatctcacc
tttgatggtagcccagaggcatttttgaaaacgccggattgccatccatttttaaagcag
cccactcatcccattgccttggaagcaggagaggtggctatatcattacggcacctggcc
aggcatacgctggtcaaggaagcattagaagtacctgttggcggaattacagccgttacg
ggtaagtcgggaatcggaaagactaccttggtgaaagacattctgataccgagcatcgtt
caaggtcatccggtaaattgtgccgccattacttgtcccaagccatatagcggtgcccaa
tatttcgagccaaaaaagctgtatgcccataacagtaccttgttggttgcgtatttggac
ctcttaaaagacattagcaaaatctttgcaaacgagacaggcttgaaggcgaaggacttt
tcctataaaaacaaatccagtcaatgcccaaactgcaagggaactggcgtggtctccacc
agcctagatgttgctgccaaccatatcgaaaaatgtgagctttgtcatggacgacggtat
caggcccatttattggaatatcaagtgggagggcttcatatcgcggaggtattggcccta
tcgcttaccgaattgcaaacttggctggccgatcaggatatggctagttcgaggcagcag
tttgtccagcaactggaagccataggcttggcccatctgagcttggagcaaacagtaaaa
tccctctcttcgggagaaaaacagcgcttgctgttgctcaattggcttaatggcaagacc
cagggccagctcttgattttggacgagccgagcaccggcctgcactatgcggatatcgat
ctgctatttgatatcctccaaaatcttagccaagccaatgacatcctcgtgatcgaccac
aatccgtatttgttggaaaaaataggtgtgggtgtggtgatagagtga
DBGET
integrated database retrieval system
