Ehrlichia chaffeensis Liberty: ECHLIB_0896
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Entry
ECHLIB_0896 CDS
T03190
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
echl
Ehrlichia chaffeensis Liberty
Pathway
echl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
echl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECHLIB_0896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
echl03021
]
ECHLIB_0896
03019 Messenger RNA biogenesis [BR:
echl03019
]
ECHLIB_0896
Transcription machinery [BR:
echl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ECHLIB_0896
Messenger RNA biogenesis [BR:
echl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ECHLIB_0896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
OB_RNB
AAA
AAA_25
AAA_22
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AHX06934
LinkDB
All DBs
Position
complement(1011586..1013037)
Genome browser
AA seq
483 aa
AA seq
DB search
MLNGKKKRVRYVSKKNANKSAGMQPATGVVQKEEEKEVVEVQEEIIEEKEEEKVPEQQEV
KVLDLSELKKKTIEDLLKIAEDLGVVSNGRMLKQEIIFHLMKKVVSDGGAAIGGGVVEIL
SDGFGFLRSPEANYAASGDDVYISAGQIKKFNLRTGDIVSGEIRAPSEKERYFTLVKAHS
INFTDMAKLQRYVHFDDLIPLYPEERILLECNDPISVSKKDISMRVIDIVAPLGKGQRAL
IVAPPRAGKTIILQQIAHSISVNHPDIELIVLLIGERPEEVTDMCRSVKGEVVSSTFDEP
GYRHVQLAEIVIEKAKRMVEHKKNVVILLDSITRLARAYNSVIPSSGKVLTGGVDSNALQ
RPKRFFGAARNIENGGSLTIIATALIETGSKMDEVIFEEFKGTGNCEIILDRKISDKRVY
PAIDISKSGTRKEDMLIDSVCLKKVWLLRRLLSSMGSVEAMEFLRDKLLITKDNNEFFDM
MNS
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaatgggaaaaagaagagagtaaggtatgttagcaaaaaaaatgctaataagagt
gcaggaatgcagcccgcgacaggtgttgtacagaaagaagaagagaaagaagtagtagag
gtacaagaggaaataatagaagagaaagaagaagagaaagtaccagaacaacaagaagta
aaagtgttagatctgagtgagctaaaaaagaagacaatagaagatttgttgaaaatagca
gaagaccttggagtggttagtaatggtagaatgctgaaacaagaaataatatttcactta
atgaaaaaagtagtaagtgatggaggtgcagcaataggaggaggggtagtagagatatta
tctgatggttttggattcttaaggtctcctgaagcaaattatgctgcaagtggtgatgat
gtatatatttctgcaggacaaataaaaaagtttaatttaagaacaggtgatatagtaagt
ggtgaaataagagcgccaagtgagaaagaaaggtattttacgttagtaaaagcacatagt
ataaactttacagatatggcaaagttacaaagatatgtacactttgatgatttaatacct
ttgtatccagaagaaagaatattattagaatgtaatgatcctatcagcgtgagtaaaaaa
gatataagcatgagagtaatagatatagttgctccattaggtaaaggacaaagggcgctg
atagttgctccaccaagagcaggaaaaacaataatattacaacaaatagcacattcaata
tctgtaaatcatccagatatagaattgatagttttacttataggtgaaagaccagaagaa
gtgacagatatgtgtagatctgtgaaaggagaggtagtaagttctacatttgatgaacct
ggatatagacatgtacaacttgcagaaattgtaatagaaaaagcaaaaagaatggtagaa
cataaaaagaatgtagtgatattacttgattcaattacaagattagcaagagcatataat
tcagtaataccgtcatcaggaaaagtattaactggtggagtagattctaatgctttacaa
agaccaaaaagattttttggagcggcaagaaatatagagaatggaggatcattgacaata
atagcaacggcactgattgaaacagggtcaaaaatggatgaagtgatatttgaagaattt
aaaggtacaggaaattgtgaaataatattagatagaaaaatatctgataaaagagtatat
ccagcaatagatatttcaaaatctggtacaaggaaagaagatatgttgatagatagtgtg
tgtttgaagaaagtatggttattaagaaggctattgtcatcgatgggatctgttgaagca
atggaatttttaagggataaattgttgataaccaaagacaataatgaattctttgatatg
atgaatagttaa
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