Ehrlichia chaffeensis Liberty: ECHLIB_1028
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Entry
ECHLIB_1028 CDS
T03190
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
echl
Ehrlichia chaffeensis Liberty
Pathway
echl00300
Lysine biosynthesis
echl00470
D-Amino acid metabolism
echl01100
Metabolic pathways
echl01110
Biosynthesis of secondary metabolites
echl01120
Microbial metabolism in diverse environments
echl01230
Biosynthesis of amino acids
Module
echl_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
echl00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ECHLIB_1028 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ECHLIB_1028 (dapF)
Enzymes [BR:
echl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ECHLIB_1028 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
DUF5023
LeuA_dimer
Motif
Other DBs
NCBI-ProteinID:
AHX07057
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All DBs
Position
1156851..1157654
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AA seq
267 aa
AA seq
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MIDFIKMHGTSNDFVIIDCRKKSYSNINYKAIANRKTGIGCDQIIIITESEKADCFMHIY
NADGSKVEMCGNAARCVGYLLSNEKQDNNITIELSDRILSCLRTSENRVQVNIGVAKFHW
TDIPTSQECDTLHLPIELEMLSDPVGINVGNPHAIFFVDSIETIPLDKLGPKLENHHLFP
KRANISIAEIVSRDKIKLRVWERGTGETASCGSGACAALVAAIRRQYTNKTAVVCLQGGD
LLISYQHDNTILMEGMVSYTFNGIYCV
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgatagattttataaaaatgcatggaacctctaatgattttgtaatcatagattgtagg
aaaaaatcttatagtaacattaactataaagcaattgccaatagaaaaacaggtattggt
tgtgaccaaatcattattataacagaatctgaaaaagcagattgctttatgcacatatat
aatgcagatggaagcaaagttgaaatgtgcggaaatgctgcaagatgtgttggatactta
ttaagcaatgaaaaacaagataataatataacaattgaactatctgaccgtatattatca
tgtttaaggacatcggaaaatagagtacaagtcaacataggagtagcaaaattccattgg
acagatatacctacatctcaagaatgtgatactttgcacttacctatagaattagaaatg
ttaagcgatcctgtaggaataaatgtagggaatcctcatgcaatattttttgttgattcc
atagagacaattccactagataaactaggaccaaaactagaaaatcatcaccttttcccc
aaaagggcaaacattagtattgctgaaattgtatccagagataaaataaaacttagggtc
tgggaacgcggaactggggagacagcctcatgtggcagcggagcatgtgcagcattagtc
gcagcaataagacgtcaatacaccaacaagacagcagtcgtatgtttacaaggtggtgat
ttattaatatcataccaacatgataacactattttaatggaagggatggtatcatataca
ttcaatggcatttattgtgtctaa
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