Ehrlichia chaffeensis West Paces: ECHWP_0402
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Entry
ECHWP_0402 CDS
T03365
Name
(GenBank) ribonuclease, Rne/Rng family domain protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
echp
Ehrlichia chaffeensis West Paces
Pathway
echp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
echp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECHWP_0402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
echp03019
]
ECHWP_0402
03009 Ribosome biogenesis [BR:
echp03009
]
ECHWP_0402
Enzymes [BR:
echp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ECHWP_0402
Messenger RNA biogenesis [BR:
echp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ECHWP_0402
Ribosome biogenesis [BR:
echp03009
]
Prokaryotic type
rRNA processing factors
ECHWP_0402
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AHX10883
LinkDB
All DBs
Position
438467..440287
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AA seq
606 aa
AA seq
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MSNHNKRILIDAVYQDGIRVAVLRDGQVVEFDQESKNKKCLKGNVYCAVVKRIEPSLQAV
FIEYGANKHGFLPFSEISLDYYNISEEEKEKLYQVLYEDSDVKNDDDVKSVDDSVACDTK
DQDNVSDCNDKLTLLKKDNLRNGKSKLPFYKLYKVQDVIKLDQKLMAQIVKEERGNKGAT
FSTFITLVGRYCIFMPNSGNKNSGISRRIEDADDRKILKNFLSAIKLPKESGIIIRTAGS
NKNQKEIEQDLSYLQSTWRSIQNSYISVTMPLLLYVEGDIIKRTLRDYCDENTQDIIVSG
SYAYELAKECVKFMFRNRVRLRIYKGSVPIFSYYKIESQICELYGNVVNLPSGGYMVITP
TEALVSIDINSGKMTGEDSIEETAYKTNMEAVKEIARQVNLRGLSGLIVIDFIDMLKYRY
CRSVESEIKEAFKYDKAKVQFGYISTFGLMEISRQRVKQSILEANTVQCSHCKGVGRVRS
LESSSGDILRDIRYCANKNRNKLINISVAGQMVEYFFNNKRQHIAEIEEEFSVSVKLTVN
QNTSSVSDFNISVENDDMLNQGKDAVNVFTVDYKISEDNKLKEEIQKTPTGNMWIKKWLT
RIFSHI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaatcataataaaaggatattaattgatgcagtatatcaagatggaattagagta
gcagtattacgtgatggacaggttgtagagtttgatcaagaatcaaagaataaaaagtgt
ttaaaaggaaatgtatattgtgctgtagtgaaacgtatagaaccatctttacaagcagta
tttattgaatatggagcaaataaacacgggtttttgcctttttctgaaatatcattagat
tattataatatttctgaagaagagaaagaaaaattatatcaagtattatatgaagattct
gatgtaaaaaatgatgatgatgtaaaatctgtagatgactctgttgcatgtgatactaag
gatcaagataatgttagtgattgtaatgacaagttgacattattgaagaaagataatttg
cgaaatggtaagtctaaattacctttttacaaattgtataaagtgcaagatgtaataaag
cttgatcaaaaattaatggcgcaaattgtaaaagaggagcgtggaaataaaggagcaact
ttttcaacatttattaccctggttggtagatattgtatatttatgccaaattctggtaat
aagaatagtggaatatcgcgtcgtattgaagatgctgatgatagaaaaattttaaagaat
tttctaagtgctataaaactgccgaaagaatcaggaataattattagaactgctgggtct
aataagaaccagaaagaaatagagcaggatttatcttatttacagtcgacttggcgaagt
atacagaatagttatataagtgttactatgcctttattgttatatgttgaaggtgatata
ataaaaagaacattacgggattattgtgatgagaatacgcaagatattattgtatcaggt
agctacgcatatgagttagcaaaagaatgtgttaagttcatgtttaggaacagggtgcgt
cttagaatttataagggcagtgttcctattttctcttattacaaaattgagtcgcaaatt
tgtgaactatatggaaatgtagttaatttgccttctggaggatatatggttattactcca
acagaagcgttggtatcaatagatattaattctggtaagatgacaggagaggatagtatt
gaggagacagcttataaaacaaatatggaagctgtaaaggaaatagctagacaagtaaac
ctgcgagggttatctggattaatagtgatagattttattgatatgttaaaatatcgctat
tgtaggtcagttgaatctgaaattaaagaagcttttaaatatgataaagcaaaagtacag
tttggctatataagtacatttggtttgatggaaatatcaagacagagggtcaagcaaagt
atattagaagcgaatacggtacaatgttcacattgtaaaggagtaggtagggttaggtct
ttggaatcttcttctggagatatattacgtgatattagatattgtgctaataagaatcgt
aataaattgataaacatttctgttgctggacaaatggtagagtatttttttaataataaa
cgtcaacatattgctgagattgaagaagaattcagtgtgtcagttaagttaactgtgaat
caaaatacgagtagtgtatctgattttaatattagtgttgaaaatgatgatatgttaaat
caaggtaaggatgctgttaatgtatttactgttgattataaaatttctgaagataataaa
ttaaaagaggaaatacaaaaaactcctactggaaacatgtggataaagaagtggttgacc
cgcatattttcacatatttaa
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