Ehrlichia chaffeensis West Paces: ECHWP_0543
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Entry
ECHWP_0543 CDS
T03365
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
echp
Ehrlichia chaffeensis West Paces
Brite
KEGG Orthology (KO) [BR:
echp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
echp03016
]
ECHWP_0543 (truA)
Enzymes [BR:
echp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
ECHWP_0543 (truA)
Transfer RNA biogenesis [BR:
echp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ECHWP_0543 (truA)
Prokaryotic type
ECHWP_0543 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF4108
Pus10_C
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AHX10541
LinkDB
All DBs
Position
622019..622756
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AA seq
245 aa
AA seq
DB search
MRYKITIEYNGSNFIGWQKQKHSSNSIQEILENAILKFSQQHTTVYVAGRTDAGVHALGQ
VAHFDLTTNLDTYVVRNAINYHLIPHAIAILSVEKTDDKFHARFSAKKRHYLYKIINRYS
PLTIDYNRAWLIHNPLNIENMIQAIEYIKGNHDFSSFRARHCQSKNPIKTIDDLKIIHNN
QSINIHISAISFLHHQVRIIVGTLVECGKNNFSPEHIKNILKAKNRSYAGMTAPPYGLYF
VKVDY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcgatataaaattactatagaatataatggatctaattttattggatggcaaaaacaa
aaacactcatcaaattccattcaagaaattcttgaaaatgcaatactcaaattttcacaa
caacatactacagtatatgttgcgggaaggactgatgctggtgtacatgctttaggtcaa
gtagcacattttgatttaacaacaaaccttgacacatatgtagtaagaaatgcaataaat
tatcacttaatacctcatgcaattgccatattaagtgtagaaaaaacagatgataaattt
catgcaagattttcagcaaaaaaacgtcactatttatacaaaataataaatcgttattca
ccattaacaatagattataatcgtgcgtggcttatacataatcctttaaatattgaaaat
atgatacaagctatcgaatatataaaaggtaatcatgatttctctagtttcagagcaagg
cattgtcaatccaaaaatccaataaaaacaatagatgatttaaaaattattcataataat
caatctattaacattcatatttctgctatatcatttttacatcatcaagtacgtattatt
gtaggtacactagttgagtgtggaaaaaataatttttcaccagaacatataaaaaatatc
ttaaaagcaaaaaatagatcttatgcaggtatgacagcaccaccatacggcttatatttt
gtaaaagtagattattaa
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