Ehrlichia chaffeensis Osceola: ECHOSC_0258
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Entry
ECHOSC_0258 CDS
T03191
Name
(GenBank) 3'-5' exonuclease family protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
echs
Ehrlichia chaffeensis Osceola
Brite
KEGG Orthology (KO) [BR:
echs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
echs03016
]
ECHOSC_0258
Enzymes [BR:
echs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ECHOSC_0258
Transfer RNA biogenesis [BR:
echs03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ECHOSC_0258
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Ofd1_CTDD
Motif
Other DBs
NCBI-ProteinID:
AHX07767
LinkDB
All DBs
Position
279410..280573
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AA seq
387 aa
AA seq
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MLIDTVKELERLCNQLLVLQPKFIAVDTEFVRSSSEYYPKLCLIQIAYGKEQFVIDVLAK
DMDLSVLGHIFYNESIIKVFHDCRQDIDALLTKFPEIPSPIFDTQIAAMFCCCYDNAVGY
SKLVEQFLGISLDKLSLKRSNWALRPLSADKIQYALNDVIYLYELYQILYNNLLDAGKLP
WFLEEMNNIVLQEVNCNDVFDIPDFGSDMTKEEIIVVRSVIEWRERLAKFFNLNREFILK
NKVMLSLVRDFIKKSDISTLGKYIKKEYLSCDAVSDLLQVIDTNQSVNIDELHYVSVNSY
NKSVLNVLLILLYNMCYKNNISQKLVASKGGLIRFLNGKFSYVMKGWRYEFFGCEVEKFM
QGKSKIIVSAQVLDNDCMDIVTTLTEM
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgttaattgatactgtcaaagaattagagcgtttgtgtaatcagctgcttgtattgcaa
cctaaatttattgcagttgatactgaatttgtaagaagtagtagtgaatattatcctaaa
ttatgtttaattcaaattgcatatggtaaagaacagtttgttattgatgttttagcgaaa
gatatggatttatcagttttaggacatattttttataatgaaagtataataaaagttttt
catgattgtagacaagatatagatgcattgttaacaaaatttccagaaattcctagccct
atatttgatactcaaattgctgccatgttttgttgttgttatgataatgcagttggatat
tctaagttagtagagcaatttttaggtatttcattagataagctgagcttgaaaagatct
aattgggcgcttcgaccattatctgctgataaaatccagtatgcacttaacgatgttata
tatttgtatgagctttatcaaatattatataacaatttattagatgctggaaagttacct
tggtttttggaagagatgaataatatagtgttacaggaagttaactgtaatgatgttttt
gatattcctgattttggttctgatatgacaaaagaggagattattgttgtaagatctgta
attgaatggcgagaaagattagcaaagttttttaatcttaatcgcgaatttatattaaaa
aacaaggtaatgctatctttagttagagattttataaaaaaaagtgatattagtacttta
ggtaagtatataaagaaagaatatttatcatgtgatgcagtgtctgatcttttacaagtt
attgatactaatcaatctgttaatattgatgagttacattatgtaagtgttaatagttat
aataagtctgttttaaatgtgctgcttatattgttatataatatgtgttacaaaaataat
atctcacagaagttagttgcatctaaaggtggcctaattaggtttcttaacggtaagttt
agttatgtaatgaaaggttggagatatgaattttttggatgcgaagttgagaaatttatg
caaggaaaatctaagattatagtctcagcacaagtactggataatgattgtatggatatt
gtaactactttgacggaaatgtag
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