Ehrlichia chaffeensis Osceola: ECHOSC_0379
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Entry
ECHOSC_0379 CDS
T03191
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
echs
Ehrlichia chaffeensis Osceola
Pathway
echs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
echs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ECHOSC_0379 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
echs03021
]
ECHOSC_0379 (rpoA)
03400 DNA repair and recombination proteins [BR:
echs03400
]
ECHOSC_0379 (rpoA)
Enzymes [BR:
echs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ECHOSC_0379 (rpoA)
Transcription machinery [BR:
echs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ECHOSC_0379 (rpoA)
DNA repair and recombination proteins [BR:
echs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ECHOSC_0379 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AHX07124
LinkDB
All DBs
Position
402719..403837
Genome browser
AA seq
372 aa
AA seq
DB search
MIFDEDSNSIAQDSGYMAVGNAYSNGVSYISMSDHWSKLTKPSSIKVVPSGASPNKADLI
IEPLESGFALTLGNALRRVMMSSLRGFAVYGVEIENVLHEFTSISGVREDVTDILLNISM
MRVKLSGMNSKVLSLKVKGPCEVRSGMIPDTDDCIILNKDLLICTLDQGVDFNIKMYVNA
GKGYVPAVKRKSVNKLGDIPINFIATNALYSPIKKASFKVESSRIGQFTDYDRLIMSVET
DGSILPDEAVALAARILQDQFQPFINFDETDEPHKKVDAKDTLPYDSNLLRKVDELELSV
RSYNCLKNDNITYIGDLVQKTESDMLRTPNFGRKSLNEINELLASMNLHLGMKIANWPPE
SIESLSKQYSEE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtgattttcgatgaggattctaattctattgcacaagattcgggttatatggcagtagga
aatgcatattctaatggagtgagttatatatcaatgagtgatcattggagtaaattaact
aagccttcttctattaaggtagttcctagtggtgcttctccaaataaggcagatttaatt
attgaacctcttgagagtggttttgctttaactctaggtaatgctttaagaagagttatg
atgtcttctttgcgtggttttgctgtttatggtgttgaaatagagaatgttttacacgaa
tttacttcgatttctggggttagagaagatgtaacagatattcttttaaatattagcatg
atgagagtaaagctttctggtatgaatagtaaagttttgtctcttaaagttaaaggacca
tgtgaagtaagatctggaatgatacctgacactgatgattgcattatactcaataaggat
ttgttaatttgcactttagatcaaggtgtagattttaatataaaaatgtatgtaaatgct
ggtaaaggttatgttcctgctgtaaagcgtaagtcagttaataaacttggtgatatacca
ataaatttcattgcaactaatgctctttatagccctataaaaaaggcgtcttttaaagta
gaaagtagtcgtattggtcaatttacagattatgatcgattgattatgtctgtggaaaca
gatgggtctattttacctgatgaagcagtagcattagctgcaagaattttacaagatcaa
tttcaaccatttattaattttgatgaaactgatgagcctcataagaaagttgatgctaaa
gatacattgccttatgattctaatctgttacgtaaagttgatgagttagaactttcagta
aggtcttataattgtttgaaaaatgataatattacttatataggagatttagtccaaaag
actgaatctgatatgttaagaactccaaattttggtagaaagtcgcttaatgagattaat
gagcttttagcaagtatgaatttgcatttaggaatgaaaattgcgaattggcctcctgaa
tccattgagagtttaagtaaacaatatagtgaagaatga
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