Ehrlichia chaffeensis Osceola: ECHOSC_1022
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Entry
ECHOSC_1022 CDS
T03191
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
echs
Ehrlichia chaffeensis Osceola
Pathway
echs00300
Lysine biosynthesis
echs00470
D-Amino acid metabolism
echs01100
Metabolic pathways
echs01110
Biosynthesis of secondary metabolites
echs01120
Microbial metabolism in diverse environments
echs01230
Biosynthesis of amino acids
Module
echs_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
echs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ECHOSC_1022 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ECHOSC_1022 (dapF)
Enzymes [BR:
echs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ECHOSC_1022 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
HEAT_GCN1_C_2
DUF5023
LeuA_dimer
Motif
Other DBs
NCBI-ProteinID:
AHX07470
LinkDB
All DBs
Position
1155909..1156712
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AA seq
267 aa
AA seq
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MIDFIKMHGTSNDFVIIDCRKKSYSNINYKAIANRKTGIGCDQIIIITESEKADCFMHIY
NADGSKVEMCGNAARCVGYLLSNEKQDNNITIELSDRILSCLRTSENRVQVNIGVAKFHW
TDIPTSQECDTLHLPIELEMLSDPVGINVGNPHAIFFVDSIETIPLDKLGPKLENHHLFP
KRANISIAEIVSRDKIKLRVWERGTGETASCGSGACAALVAAIRRQYTNKTAVVCLQGGD
LLISYQHDNTILMEGMVSYIFNGIYRV
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgatagattttataaaaatgcatggaacctctaatgattttgtaatcatagattgtagg
aaaaaatcttatagtaacattaactataaagcaattgccaatagaaaaacaggtattggt
tgtgaccaaatcattattataacagaatctgaaaaagcagattgctttatgcacatatat
aatgcagatggaagcaaagttgaaatgtgcggaaatgctgcaagatgtgttggatactta
ttaagcaatgaaaaacaagataataatataacaattgaactatctgaccgtatattatca
tgtttaaggacatcggaaaatagagtacaagtcaacataggagtagcaaaattccattgg
acagatatacctacatctcaagaatgtgatactttgcacttacctatagaattagaaatg
ttaagcgatcctgtaggaataaatgtagggaatcctcatgcaatattttttgttgattcc
atagagacaattccactagataaactaggaccaaaactagaaaatcatcaccttttcccc
aaaagggcaaacattagtattgctgaaattgtatccagagataaaataaaacttagggtc
tgggaacgcggaactggggagacagcctcatgtggcagcggagcatgtgcagcattagtc
gcagcaataagacgtcaatacaccaacaagacagcagtcgtatgtttacaaggtggtgat
ttattaatatcataccaacatgataacactattttaatggaagggatggtatcatatata
ttcaatggcatttatcgtgtctaa
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