Enterobacter chuandaensis: RQP59_01065
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Entry
RQP59_01065 CDS
T11050
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
echu Enterobacter chuandaensis
Pathway
echu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
echu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RQP59_01065 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
echu03021
]
RQP59_01065 (rpoC)
03400 DNA repair and recombination proteins [BR:
echu03400
]
RQP59_01065 (rpoC)
Enzymes [BR:
echu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RQP59_01065 (rpoC)
Transcription machinery [BR:
echu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RQP59_01065 (rpoC)
DNA repair and recombination proteins [BR:
echu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RQP59_01065 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WNS38196
UniProt:
A0AA96RTM5
LinkDB
All DBs
Position
239881..244104
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERHQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAG
LASLHARVKVRITEYEKDANGEFVAKTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGVEEQQVSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVL
GRVTAEDILKPGTADILVPRNTLLHEQWCDLLEANSVDSVKVRSVVSCDTDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKL
SNAKSVVNSAGKLVVTSRNTELKLIDEFGRTKESYKVPYGAVMAKGDGEQVAGGETVANW
DPHTMPVITEVSGFIRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTTGGKDLRPALKI
VDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSEPYEEMIPKWRQLNVFE
GERVERGDVVSDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQM
LRKATIENAGSSDFLEGEQVEYSRVKIANRDLEANGKIGATFARDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGELPA
APQVTAEDASASLAELLNAGLGGSDNE
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagatttattaaagtttctgaaagcgcagactaaaaccgaagagtttgatgcgatc
aaaattgctctggcttcgccagacatgatccgttcatggtctttcggtgaagttaaaaag
ccggaaaccatcaactaccgtacgttcaaacctgagcgtgacggccttttctgtgcgcgt
attttcgggccagtaaaagactacgagtgcctgtgcggtaagtacaagcgcctgaaacac
cgcggtgtgatctgtgagaagtgcggcgttgaagtgacccagaccaaagtacgccgtgag
cgtatgggccacatcgagctggcgtctccgactgctcacatctggttcctgaaatctctg
ccgtcccgtatcggcctgctgctggatatgccgctgcgcgatattgaacgtgtactgtac
ttcgaatcttatgtggttatcgaaggcgggatgacgaacctggaacgtcaccagatcctg
actgaagagcagtatctggacgcgctggaagagttcggtgacgaattcgacgcgaagatg
ggtgcggaagctattcaggccctgctgaagagcatggatctggagcaggagtgcgagcag
ctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaaaaagctgaccaagcgt
atcaaactgctggaagcgttcgttcagtctggtaacaagccagagtggatgatcctgacc
gttctgccggttctgccgccagatctgcgtccgctggttccgctggatggtggtcgtttc
gcaacgtccgatctgaacgatctgtatcgtcgcgtgatcaaccgtaacaaccgtctgaaa
cgtctgctggatctggctgcgccggacatcatcgtacgcaacgaaaaacgtatgctgcag
gaagcggtagatgccctgctggataacggtcgtcgcggtcgtgcgatcaccggttctaac
aaacgtcctctgaaatctttggccgacatgatcaaaggtaagcagggtcgtttccgtcag
aacctgctcggtaagcgtgttgactactccggtcgttctgtaatcaccgtaggtccatac
ctgcgtctgcatcagtgcggtctgccgaagaaaatggcactggagctgttcaaaccgttc
atctacggcaagctggaactgcgtggcctggccaccaccatcaaagccgctaagaaaatg
gttgagcgtgaagaagctgtcgtttgggatatcctggacgaagttatccgcgaacacccg
gtactgctgaaccgtgcaccaacactgcaccgtctgggtatccaggcatttgagccggtc
ctgatcgaaggtaaagctatccagctgcacccgctggtttgtgcggcctataacgccgac
ttcgatggtgaccagatggctgttcacgtaccgctgacgctggaagcccagctcgaagcg
cgtgcgctgatgatgtctaccaacaacatcctgtctcctgcgaacggcgagccaatcatc
gttccttctcaggacgttgtattgggtctgtactacatgacccgtgactgtgttaacgcc
aaaggcgaaggcatggtgctgactggcccgaaagaagctgagcgtatttatcgcgctggc
ctggcctctctgcatgcgcgcgttaaagtgcgtatcactgaatacgaaaaagatgcaaac
ggcgaattcgttgcgaaaaccagcctgaaagacacgaccgttggccgtgccattctgtgg
atgatcgtaccgaaaggtctgcctttctccatcgtcaaccaggcgctgggcaagaaagcg
atctccaaaatgctgaacacctgttaccgcattctgggtctgaagccgaccgttatcttc
gctgaccagacaatgtataccggctttgcttatgcagcgcgttcaggtgcatctgttggt
attgatgacatggtcatcccagagaagaaacacgagatcatctctgaagcggaagccgaa
gttgctgagatccaggagcagttccagtctggtctggttaccgcgggcgaacgctacaac
aaagttatcgatatctgggcagcggcgaacgatcgtgtatccaaagcgatgatggataac
ctgcagaccgaaaccgtgattaaccgtgacggcgtcgaagagcagcaggtttccttcaac
agcatctacatgatggccgactccggtgcgcgtggttctgcagcacagattcgtcagctg
gcaggtatgcgtggtctgatggcgaagccagatggctccatcatcgaaacgccaatcacc
gcgaacttccgtgaaggcctgaacgtactccagtacttcatctccacgcacggtgcgcgt
aaaggtctggcggataccgcactgaagacagcgaactccggttatctgacgcgtcgtctg
gttgacgttgcgcaggatctggtggtgaccgaagacgattgtggcaccctcgaaggtatc
accatgaccccggttatcgagggtggtgatgttaaagagccactgcgcgatcgcgttctg
ggtcgtgtgaccgcggaagacattctgaagccgggcaccgcagacattctggttccacgc
aatacgctgctgcacgaacagtggtgtgacctgctggaagcgaactctgttgactccgtg
aaagtgcgttccgttgtatcctgtgacaccgactttggtgtgtgtgcgcactgctacggt
cgtgacctggcgcgtggccacatcatcaacaaaggtgaagccatcggcgttatcgcggca
cagtccatcggtgagccaggtacacagctgacgatgcgtacgttccacatcggtggtgcg
gcatctcgtgcggctgctgaatccagcattcaggtgaaaaacaaaggtagcatcaagctc
agcaacgcgaagtctgttgttaactccgcaggcaagctggttgtgacctctcgtaacacc
gagctgaagctgatcgacgaattcggtcgtaccaaagagagctataaagtgccttacggt
gcggttatggcgaaaggtgatggcgagcaggttgccggcggtgaaaccgttgcaaactgg
gatccacacaccatgccggttatcaccgaagtaagtggtttcatccgctttactgacatg
attgacggccagaccattactcgtcagaccgacgagctgaccggtctgtcttctctggtg
gttctggattctgctgaacgtactaccggcggtaaagatctgcgtcctgcactgaaaatc
gttgatgctcagggtaacgacgttctgatcccaggtaccgatatgcctgcgcagtacttc
ctgccgggtaaagcgattgtacagctggaagatggcgtacagatcagctctggtgacacc
ctggcgcgtattcctcaggaatccggcggtaccaaggacatcaccggtggtctgccacgc
gttgcggacctgttcgaagcacgtcgtccgaaagagcctgcaatcctggctgaaatcagc
ggcatcatctccttcggtaaagagaccaaaggtaagcgccgtctggttatcaccccagta
gatggcagcgagccgtacgaagagatgattcctaagtggcgtcagctcaacgtgttcgaa
ggtgaacgtgtagaacgtggtgacgtggtttccgacggtccagaagcgccgcacgacatc
ctgcgtctgcgtggtgtgcatgctgttactcgttacattgttaacgaagtacaggacgta
taccgcctgcagggcgttaagattaacgataagcacatcgaagttatcgttcgtcagatg
ctgcgtaaagcaaccatcgaaaatgcgggcagctccgacttcctggaaggcgagcaggtt
gaatactcacgcgttaagatcgctaaccgcgatctggaagcgaatggcaaaatcggtgcg
accttcgcacgcgatctgctgggtatcaccaaagcgtctctggcaaccgagtccttcatc
tctgcagcatcgttccaggaaaccacgcgtgtcctgaccgaagccgctgttgcaggtaaa
cgtgatgaactgcgcggtctgaaagagaacgtcatcgtgggtcgtctgatcccggccggt
accggttatgcgtaccaccaggatcgtatgcgtcgtcgcgcagcgggcgaactgccagct
gcaccgcaggttactgctgaagatgcatccgcgagcctggcagaactgctgaacgcaggt
ctgggcggttccgacaacgagtaa
DBGET
integrated database retrieval system
