Enterobacter chuandaensis: RQP59_07060
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Entry
RQP59_07060 CDS
T11050
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
echu Enterobacter chuandaensis
Pathway
echu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
echu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RQP59_07060 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
echu03019
]
RQP59_07060 (rhlE)
Enzymes [BR:
echu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RQP59_07060 (rhlE)
Messenger RNA biogenesis [BR:
echu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RQP59_07060 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
WNS39304
UniProt:
A0AA96M483
LinkDB
All DBs
Position
1476521..1477903
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AA seq
460 aa
AA seq
DB search
MSFDSLGLNPEILRAIAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
ELLVKNQPHAKGRRPVRALILTPTRELAAQIGENVREYSRYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDNIEILVLDEADRMLDMGFIHDIRRVLAKLPPR
RQNLLFSATFSDEIKALAEKLLHNPLEVEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIETPGYEVDPSIKAEPIQNGRQGGGRGQGGGGRGQQPRRAEGGAPKSSGK
PPRRNNDSKPAGENPWRSGEGKPAGEGQRRRRPRKPANPQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaacccggaaattctgcgcgcgatcgcagagcagggc
tacgttgagccaacccctatccagcagcaggcgatccccgccgtgcttcagggccgtgac
ctgatggccagcgcccagaccggcaccggtaaaaccgcgggctttacgctgccgctgtta
gagctgctggtaaaaaaccagccgcatgccaaagggcgtcgtccggtgcgtgcgctgatc
ctcactccaacccgcgagctggcagcccagattggcgagaacgtgcgtgagtacagccgc
tacctcaacattcgctcgctggtggttttcggtggcgtgagcattaacccgcagatgatg
aagttgcgcggcggcgtggacgtgctggtggcaacgccgggccgtctgctggatctggaa
caccagaatgcggtgaagctcgataacatcgaaattctggtgctggacgaagccgaccgc
atgcttgatatgggcttcatccacgatattcgtcgcgtgctggcaaagctgccgccgcgt
cgtcaaaatctgctcttctccgcgaccttctccgacgagatcaaagcgctggcggaaaag
ctgctgcataacccgctggaagtagaagtggcgcgccgtaacactgcctccgagcaggtg
acgcagcacgttcactttgttgataaaaagcgcaagcgggaactgctctcccagatgatc
ggccagggcaactggcagcaggtgctggtcttcacccgcaccaagcacggcgccaaccac
ctggcggaacagctgaataaagacggcatccgcagcgccgccattcacggtaacaagagc
cagggtgcgcgtacccgcgcgctggcagacttcaaatccggcgacatccgcgtgctggtg
gcgaccgacatcgccgcccgaggcctggacatcgaagagctgccgcatgtggtgaactac
gagctgccaaacgtgccggaagactacgttcaccgtattggccgtaccggccgtgcggcg
gcaaccggtgaagcgctctctctggtctgcgtggacgagcacaagctgctgcgcgacatc
gaacgcctgctgaagaaagagatcccacgcatcgaaaccccgggctacgaagtggatccg
tccatcaaagccgagccgattcagaacggtcgtcagggtggtggtcgcggtcagggcggc
ggcggtcgcggtcagcagccgcgtcgtgccgaaggtggcgcgccgaagtcatccggtaaa
ccgccgcgtcgtaacaacgacagcaaaccggccggtgaaaacccgtggcgcagcggggaa
gggaaaccggcaggggaagggcagcgccgtcgccgcccgcgcaagcctgctaacccgcag
taa
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