Enterobacter chuandaensis: RQP59_11840
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Entry
RQP59_11840 CDS
T11050
Symbol
pdeR
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
echu Enterobacter chuandaensis
Pathway
echu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
echu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RQP59_11840 (pdeR)
Enzymes [BR:
echu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
RQP59_11840 (pdeR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
PAS_10
Pro-rich_19
Motif
Other DBs
NCBI-ProteinID:
WNS35810
UniProt:
A0AA96RP66
LinkDB
All DBs
Position
complement(2439538..2441529)
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AA seq
663 aa
AA seq
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MIDDLEQNLLFRYMGTHSPWWRLSADSNALHLAASENADVIQVVMLDDEQALLIRQLTVI
TSSISLNLSLYGEEVPVHLVGRKITRNEWAGTASAWNDTPSVARDLAQGLSFAEQVVSEA
NSVIVILDQHGNIQRFNRLSEEYTGLKEHEVIGQNVFKLFMSRSEAAASKRNIAGFFRNG
SSYEVERWVKTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTD
TITGLPNRNAIHELISDAIRSRGETQIGVVYLDLDNFKKVNDAYGHMFGDQLLQAVALAI
LSCLDEGQVLARLGGDEFIVMATNTSQGSLEAMASRILTRLRQPFRIGLIEVYTGCSLGI
ALAPQHGNDRESVIRNADTAMYTAKENGRGKFCVFSPEMNQRVFEYLWLDTNLRKALDND
QLLIHYQPKMTWRGEVRSLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVMLDVV
RQVAKWRDKGINLRVAVNVSARQLADQTIFSDLKQVLKDLRFEYCPIDVELTESCLIENE
ELALSVIQQFSRLGAQIHLDDFGTGYSSLSQLARFPIDAIKLDQSFVRDIHKQPISQSLV
RAIVAVAQALNLQVIAEGVENAKEDAFLTKNGVNERQGFLFAKPMPAAAFERWLKRYQAR
QQR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgattgacgacctggagcagaatttgctgtttcgttacatgggtactcacagcccatgg
tggcgattgtccgctgacagcaacgctctgcatcttgccgccagcgaaaatgccgatgtt
attcaggtcgtgatgctggatgatgaacaggctctcctgattcgtcagctcacggtgatc
acctccagcatttctctgaacctttccctttacggcgaagaggttcccgtccatcttgtc
gggcgcaaaattacccgtaatgaatgggccggtacggcttccgcctggaacgatacaccc
tccgtggcacgcgacctggcgcaggggctttctttcgcggaacaggttgtttctgaagcg
aactccgtcatcgttattctcgaccaacacggtaatatccagcgttttaaccgcctgagc
gaagagtacaccggcctgaaagaacacgaagtcatcggccagaacgtgtttaagctcttc
atgagccgcagcgaagcggctgcctcgaagcgtaacatcgcgggtttctttcgcaacggc
agctcttatgaagttgaacgctgggtgaaaacgcgcaaaggacaacgattgtttctgttc
agaaacaaatttgtgcacagcggcagcggtaaaaatgaaatttttcttatctgttccggg
accgacattacggaggaacgccgggcgcaggagcgtctgcgcgtgctggccaacaccgat
accatcaccggcttgccaaaccgcaatgccatccacgaactgatttctgacgccatccgt
agccgcggcgaaacgcagattggcgtggtgtatctcgacctggataactttaaaaaggtc
aacgatgcctacgggcatatgtttggcgatcagctgctccaggcggttgcgctcgccatt
ctgagctgtcttgatgaaggacaggtgctggcgcggctcggcggcgatgagtttatcgtg
atggccaccaatacctctcagggttcgctggaagcgatggcgtcgcgcattctgacccgc
ctgcgccagccgttcagaatcggtctgatcgaggtttacaccggttgctccctggggatc
gccctcgcaccgcagcacgggaacgatcgggaaagtgtaattcgcaatgccgacactgcc
atgtacaccgccaaggaaaacggtcggggtaagttctgcgtcttttccccagaaatgaac
cagcgcgtatttgagtatctgtggctggacaccaacctgcgtaaagcgttggataacgat
cagctcctgatccattaccagcccaagatgacctggcgcggagaagtgagaagtcttgaa
gcgctggtccgctggcagtcgcccgagcgcggcctgatcccgccgctggaattcatctcc
tacgccgaggagtcggggctgattgtgccgctgggccgctgggtcatgctggatgtggtt
cgccaggtggcgaaatggcgtgacaaggggattaacctgcgggtggcggtgaacgtctct
gcacgtcagctggccgaccagaccatattcagtgacttaaagcaggtgctgaaggatctg
cgttttgagtactgccctatcgacgtagagttaaccgaaagctgtcttattgaaaacgaa
gagctggcgctttccgtgatccagcaattcagccgcctcggggcacaaattcatctggat
gattttggtaccggctattcttccctttcccagctggcgcgttttccaatcgacgccatt
aaacttgatcaatcctttgtcagggatatccacaagcagccgatctcacagtctctggta
cgcgccattgtcgcagtagcccaggcgttaaacctgcaggtgatcgccgaaggggtggag
aacgcaaaagaagacgcctttctgaccaagaacggcgtcaacgaacggcagggttttctt
tttgctaagccgatgcccgctgccgcattcgagcggtggctaaaacgatatcaagcgcga
caacagcgttga
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