Enterobacter chuandaensis: RQP59_18765
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Entry
RQP59_18765 CDS
T11050
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
echu Enterobacter chuandaensis
Brite
KEGG Orthology (KO) [BR:
echu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
echu03009
]
RQP59_18765 (rlmD)
Enzymes [BR:
echu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RQP59_18765 (rlmD)
Ribosome biogenesis [BR:
echu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RQP59_18765 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PCMT
RrnaAD
Cons_hypoth95
MTS
Methyltransf_11
UPF0020
TRM5-TYW2_MTfase
Methyltransf_4
Methyltransf_15
Ubie_methyltran
Methyltr_RsmB-F
Methyltransf_23
Methyltransf_12
FtsJ
CMAS
Methyltransf_32
PrmA
TPMT
MetW
Motif
Other DBs
NCBI-ProteinID:
WNS37095
UniProt:
A0AA96M408
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All DBs
Position
complement(3860683..3861981)
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AA seq
432 aa
AA seq
DB search
MAQFYSAKRRVTTRQIITVEATDLDPFGQGVARHNGKTLFITGLLPAERAEITLTEDKRQ
YARGQVKRRLNDSPERVEPRCPHFGVCGGCQQQHVSTELQQKSKSRALARLLKHEADEII
ADEPWGYRRRARLSLSYQPKTERLEMGFRKAASSDIVDVKQCPILVPQLEALLPDVHRCL
ASLDGVRALGHVELVLANNGPLMVLRHTAPLSKKDREKLERFSHSHELALFLAPQSEILE
QVTGEAPWYASDGLRLTFSPRDFIQVNDGVNQQMVEKALTWLDVKPTDRVLDLFCGMGNF
TLPLARRAASVVGVEGVEALVAKGQENAQQNGLQNVTFFHQNLEEDVTRQPWAKQGFDKI
LLDPARAGAPGVMQHIIKLAPERVVYVSCNPATLARDSEALISAGYQIRRLAMLDMFPHT
GHLESMVLFEHI
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaagcgacgcgtgacgacgcgtcaaatcattactgttgaa
gccacggacctcgatccttttggtcagggagtggctcgtcacaatggtaagactctgttt
ataacaggtttgctgccagcagaacgagcagaaattacgctgacggaagacaaacgccag
tacgcgcgcggccaggtgaagcgtcgcctcaacgatagcccggagcgcgtggagccccgc
tgtccacattttggcgtgtgcggaggctgccagcaacagcatgtgagcacagaattacag
caaaaaagtaaaagccgggcgctggcgcgtctcctcaaacacgaagctgacgagattatc
gccgatgagccctggggatatcgccgccgcgcgcgcctgagcctgagctatcagcccaaa
acggagcggctggagatgggttttcgcaaagcggcctccagcgatattgttgatgtaaag
cagtgccccattttggtgccccagcttgaagcattgcttccggacgtgcaccgctgtctt
gcatcgctggatggggtgcgcgcattgggccatgttgaactggtgctggcaaacaacggc
ccgctgatggtgctgcgccacaccgcaccgctgtcgaagaaagatcgcgaaaaactggaa
cgcttttcgcattctcatgagcttgcgcttttcctcgcgccgcaaagcgagatacttgag
caggtaacgggtgaagccccctggtatgcgtcagacgggctacgcttaacgttcagcccg
cgggatttcattcaggtgaatgatggcgttaaccagcagatggttgagaaagcgctgacg
tggcttgacgtaaagcccactgaccgggtactcgatctgttctgcggcatgggcaatttt
actctgccgctggcgcgcagagccgcaagcgtggtcggtgtggaaggcgttgaggcgctg
gtagccaaaggccaggagaacgcccaacagaacggcttgcaaaatgtgacgttctttcat
caaaatcttgaggaagatgtcacccggcagccgtgggcaaagcagggctttgacaaaatc
cttctcgacccggcgcgtgcaggcgcaccgggcgtgatgcagcatattattaaactcgcg
cctgagcgtgtggtctatgtttcctgtaacccggcaacgcttgcccgggacagtgaggca
ttaatcagcgcgggttaccagattcggcgtctggcaatgctggacatgttcccgcacact
ggacacctggaatcgatggtgttgttcgagcacatctaa
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