Enterobacter chuandaensis: RQP59_19290
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Entry
RQP59_19290 CDS
T11050
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
echu Enterobacter chuandaensis
Pathway
echu03410
Base excision repair
echu03430
Mismatch repair
echu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
echu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RQP59_19290 (recJ)
03430 Mismatch repair
RQP59_19290 (recJ)
03440 Homologous recombination
RQP59_19290 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
echu03400
]
RQP59_19290 (recJ)
DNA repair and recombination proteins [BR:
echu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RQP59_19290 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RQP59_19290 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RQP59_19290 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WNS37189
UniProt:
A0AA96M0F1
LinkDB
All DBs
Position
complement(3973812..3975545)
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AA seq
577 aa
AA seq
DB search
MKAPIKLRRREAVEHVDLPDDLPALLKRLYASRGVRRAEDLERSVKGMLPWQQLSGIEKA
TEMLYNALREGTRIVVVGDFDADGATSTALSVLSLRALGCDNVTYLVPNRFEDGYGLSPE
VVDQAHARGAQMIMTVDNGISSHAGVDHAHALGIPVLVTDHHLPGETLPDAEAIINPNLR
DCDFPSKSLAGVGVAFYLMLALRTLLRDKGWFESRGIAVPNLAEYLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGKCRPGIKALLEISNRDPLKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQAEALTLCEKLERSGDTLPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYP
GLMIKFGGHAMAAGLSLEEAKFDEFQRLFGELVTDWIDPALLQGEVVSDGELSPLEMTMD
VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRIVGERHLKVMVEPVGGGPLLDGIAFNVDTS
IWPDNGVREVELAYKLDINEFRGNRTLQIIIDNIWPI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagcccccatcaaattgcgccgccgcgaggcggttgaacacgttgatttgccggac
gatctcccggcgctcctgaagcgcctctacgccagccgcggcgtgcgtcgcgcggaggat
cttgagcgcagcgtgaaagggatgctgccatggcagcagctgagcggtatcgaaaaagct
accgaaatgctctacaacgcgcttcgtgagggaacgcgcattgtggtggttggcgatttc
gacgccgacggcgcaaccagcaccgcgctgagcgtgctcagcctgcgcgcgctgggctgc
gataacgtcacctatctggtgccgaaccgctttgaagacggctacggcctcagcccggag
gtggtcgatcaggcccacgcccgcggtgcgcagatgatcatgaccgtcgataacgggatc
tcttcccatgcgggcgtcgatcatgcccacgctttagggatcccggtgctggtcaccgat
catcacctgcccggcgaaacgctgccggatgcagaagcgattattaatcccaacctgcgc
gactgcgatttcccgtcgaaatccctcgctggcgtgggcgtggcgttttatctgatgctg
gcgttgcgtaccctgttacgcgataagggctggttcgagtcccgcgggattgccgtgcca
aacctggccgaatatctcgacctggtggcgctgggcaccgtggcggacgtggtgccgctt
gatgccaacaaccgtattctcacctggcagggcttaagccgcattcgggcaggcaagtgc
cgcccggggattaaggcgctgctggaaatctccaaccgcgacccgcttaagcttgcggca
agtgacttaggctttgccctagggccgcgtcttaacgctgccggaaggctggacgatatg
tccgtcggcgtggcgttgctgctgtgcgacaacatcggcgaagcgcgcgtgctggcgaac
gaactggacgccctgaaccagacccgtaaagagattgagcaggggatgcaggccgaagcg
ctgaccctgtgcgaaaaacttgagcgcagcggcgatacgctgccgggcgggctggcaatg
taccaccccgagtggcatcagggcgtggtcggcattctggcgtcgcgcattaaagagcgc
ttccaccgcccggtgatcgcgtttgcgcctgcgggcgacggcacgctgaaaggttctggc
cgttcgattcaggggctgcacatgcgcgatgcgctggagcgtctggatacgctgtatccg
ggtctgatgatcaagttcggcggccacgcgatggcggcaggcctgtcgctggaagaggca
aagttcgacgaatttcagcggctgtttggtgaactggtcaccgactggatcgacccggcc
ctgttgcagggggaagtggtgtccgatggcgagctttcaccgcttgagatgacgatggac
gtggcgcaaatgctccgcgatgccggtccatgggggcagatgttcccggaaccgctgttc
gacgggcgattccgtctgctgcagcagcgtatcgttggcgaacgccacctgaaagtgatg
gtcgagcccgtgggcggcggaccgctgctggacggcatcgccttcaacgttgacacctcc
atctggccggacaacggcgtgcgtgaggtcgagctggcgtacaaactggatataaacgag
tttcgcggaaaccgcacccttcagatcatcatcgacaatatctggccaatttag
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