Enterobacter chuandaensis: RQP59_20740
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Entry
RQP59_20740 CDS
T11050
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
echu Enterobacter chuandaensis
Pathway
echu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
echu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RQP59_20740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
echu03019
]
RQP59_20740
03009 Ribosome biogenesis [BR:
echu03009
]
RQP59_20740
Enzymes [BR:
echu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RQP59_20740
Messenger RNA biogenesis [BR:
echu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RQP59_20740
Ribosome biogenesis [BR:
echu03009
]
Prokaryotic type
rRNA helicases
RQP59_20740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
DeaD_C
ResIII
CMS1
DRTGG
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WNS37458
UniProt:
A0AA96M2T4
LinkDB
All DBs
Position
complement(4257611..4259506)
Genome browser
AA seq
631 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
SLPLLNNIDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEADLPNADLLGKRRLEKFAAKVQQQLESSDLDQYRALLSQIQPVAEGEELD
METLAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRPERGGE
DRPRRERRDAGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRPDRGGERRGGGRGFGGERREGGRSEGR
GGEGRRFSGERRENRGPRREEGTSRRRFGDA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgtattccacacctg
ctttctggtcgtgacgtgctgggcatggcccagactggtagcggtaaaactgcagcattc
tcgctgccgctgctgaacaacatcgatccggacctgcgtgcaccgcagatcctcgttctg
gctccaacccgtgaactggctgttcaggttgctgaagccatgacggaattctctaaacat
atgcgcggcgtaaacgtggtagccctgtacggcggccagcgttatgacgtgcagttacgc
gccctgcgccagggcccacagattgtcgtcggtacgccgggccgtctgctggatcacctg
aagcgcggtaccctggatctctctaaactgagcggcctggtactggatgaagccgatgaa
atgctgcgtatgggcttcatcgaagacgtcgaaaccatcatggctcagatcccggaaggt
caccagaccgcgctgttctctgccaccatgccagaagcgattcgtcgcattacccgccgc
ttcatgaaagagccgcaggaagtgcgtattcagtccagcgtaactactcgcccggatatc
agccagagctactggtctgtgtacggcatgcgcaaaaacgaagcgctggtacgtttcctg
gaagcggaagattttgatgcggcgattatcttcgtgcgtaccaaaaacgcgaccctggaa
gtggctgaagcgctggagcgtaacggctacaacagcgcagcgctgaacggcgacatgaac
caggctctgcgtgagcagacgctggagcgtctgaaagacggccgtctggatatcctgatt
gcaaccgacgtggcagcacgtggtctggacgttgagcgtatcagcctggttgtaaactac
gacatcccgatggactccgagtcttacgttcaccgtatcggtcgtaccggtcgtgcgggt
cgtgctggtcgtgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgcaacatc
gaacgcaccatgaagctgaccattccagaagcggacctgccaaacgcagacctgctgggc
aaacgccgtctggaaaaattcgccgcaaaagtacagcagcagctggaaagcagcgatttg
gatcagtaccgtgcactgctgtcgcagattcagcctgtcgctgaaggcgaagagctggat
atggaaaccctggctgcagcactgctgaaaatggctcagggcgaacgtagcctgatcgtg
ccaccagatgcaccgatgcgtcctaagcgtgagttccgtgaccgtgacgatcgcttcgaa
cgtcgtggcgaccgtaacgatcgtggtccacgtggtgaccgcccagagcgtggtggtgaa
gaccgtccacgtcgtgaacgtcgtgacgcgggcgatatggaactgtatcgcattgaagtg
ggccgtgatgatggtgttgaagttcgtcacatcgttggcgcgatcgctaacgaaggcgac
atcagcagccgttacattggtaacatcaagctgttcgcatcccactccaccatcgagctg
ccaaaaggcatgccgggcgaagtactgcagcactttactcgcacccgcatcctgaacaag
ccgatgaacatgcagctgctgggcgatgcacagccacgtcctgaccgcggcggtgaacgt
cgtggcggtggtcgcggtttcggcggcgagcgccgtgaaggcggtcgcagcgaaggtcgc
ggtggtgaaggtcgtcgtttctccggtgagcgccgtgaaaaccgtggcccacgtcgtgaa
gaaggcaccagccgtcgtcgtttcggtgacgcgtaa
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