Ehrlichia chaffeensis Saint Vincent: ECHSTV_0347
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Entry
ECHSTV_0347 CDS
T03348
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
echv
Ehrlichia chaffeensis Saint Vincent
Pathway
echv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
echv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ECHSTV_0347 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
echv03400
]
ECHSTV_0347 (uvrA)
DNA repair and recombination proteins [BR:
echv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ECHSTV_0347 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ECHSTV_0347 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
BCA_ABC_TP_C
nSTAND3
AAA_22
DnaJ_CXXCXGXG
SLFN-g3_helicase
Viral_helicase1
AAA_23
AAA_7
cobW
AAA_21
GXGXG
Motif
Other DBs
NCBI-ProteinID:
AHX08522
LinkDB
All DBs
Position
complement(398862..401747)
Genome browser
AA seq
961 aa
AA seq
DB search
MTDLISIRNAKEHNLHNINIDLPKNKLIVITGVSGSGKSSLAFDTIYAEGQRRYVESLSS
YARQFLDSCTRPEVESITGLSPTIAISQKLLSKNSRSTVSTTTGIYDYLRIMYSKIGTPY
SPITGLPITKQSLSQIVETILKLPIGTKISILGILIRGKRGEHNKEIYEIKKQHYKLLKI
DGITYDINNIPQLDRNKKHDIHVIINQISVLENSIDNITENIKTALKIGNGITHIEILDL
PQEYKSDTYYKNQVLVFSENFACPETEFSIEEVEPRLFSFNTSYGSCKICSGIGKKYSVD
KNLVIKNDNLSISEGAIHPIGPIDIKTINYKINSQFSYHYSNIILSLAKHYSFDLTTPWK
KLDDNIKDIILFGSKEVQIPTHYQHEGYKYSRNKPFEGIINILNNKEDIVIEKLAEQYSS
INICNECQGFRLRQEALSVKIDNKHIGELTRLSVIDAISWCKALPSRLNDQQKHISHKIL
DEIIKRLIFLKNVGLGYLTLDRESGTLSGGESQRIKLASQIGSGLTGIIYVLDEPSIGLH
QRDNTLLINTLKTLRDIGNTVIVVEHDEETITNADYVVDIGPGAGQNGGYVIASGTPKEI
MDNHNSITGQYLSNKKIIPNFKKHRTFYKWIEIIGAHVNNLQNIDVKIPLHAFTCITGVS
GSGKSSLINNTLYQHATDQLNNINCIYSKCTSISGLEHIDKVIKIDQSPIGRTPLSNSAT
YTGLFTHIRSWFAELPLSKERGYTISRFSFNSKGGRCEACKGDGQVKIEMHFLPDVYVKC
EQCKGSRYNKETLEVTHQGKSIADILDMTVDQAYEFFIHLPLIKEKLDALRSVGMGYIKI
GQTSNTLSGGEAQRIKLSKELSKRSTGKTLYILDEPTTGLHFADIDNLLHVLHKLRDLGN
TIVVIEHNLHVIKTAEYIIDIGPNGGDDGGQVVATGTPEEIVQNPHSITGQYLKPYLNAQ
S
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgactgatttgattagtatacgtaatgctaaagaacataatcttcacaacataaatata
gatcttccaaaaaataagttaattgtaataactggagttagtggatctggaaaatccagt
ctcgcatttgatacaatatatgcagaagggcagcgcagatatgtagaaagtctatcatcc
tatgctcgtcagtttttagattcatgtacaagaccagaagtagaatcaatcacaggtctt
tctccaactattgcaatcagtcaaaagcttttatcgaaaaattcaagatctactgtatca
actactacaggaatttatgattatttaagaatcatgtattccaagataggaacaccatat
tccccaataactggattacctataacaaaacaatcactttctcaaatagtagaaactatc
ttgaaattaccaataggaacaaaaatttcaattttaggtatactaataagagggaaacga
ggagaacataataaagaaatatatgaaatcaaaaaacagcactacaaactattaaaaatt
gatggtattacttatgatattaacaatattccacaactagatagaaataaaaagcatgat
attcatgtaatcataaatcagatatcagttctagaaaattctattgacaatataactgaa
aacataaaaactgcgttaaaaataggtaatggtataactcacatagaaatacttgattta
ccacaagaatacaaaagtgacacgtattacaagaatcaggtactggttttttcagaaaat
tttgcatgtcctgaaacagaatttagcatagaagaagtagaaccaagattattttcattc
aatacatcatatggatcatgcaaaatttgtagtggaataggaaaaaaatatagcgttgac
aaaaatctagtcataaaaaatgataatttatcaatttcagaaggagctatacatcctata
ggcccaattgatataaaaaccattaattacaaaattaattcgcaatttagctatcattac
tcaaatattattttgtccttagcaaaacattatagttttgatttaacaacaccatggaaa
aaattagatgataatataaaagatataattttatttggcagcaaagaagtacaaatacct
acacattatcaacacgaaggatataaatattctagaaacaaaccatttgaaggcattata
aatatcttaaataacaaagaagacatagttatcgaaaaattagctgaacaatattcatct
ataaacatatgtaatgaatgccaaggatttcgactaaggcaggaagcactatcagtaaaa
attgacaataaacatatcggagaattgacaaggttatccgttatagacgcaatatcatgg
tgtaaagcactaccgtctagactcaatgatcaacagaagcatatttcacataaaatatta
gacgaaatcattaaaagactaatatttttaaaaaatgttggattaggttatttaacactc
gatcgtgaatcaggaacattatctggaggagaaagtcaaagaataaaactagcatcacaa
attggatccggattaacaggaataatttacgtattagatgaaccttcaatcgggttacat
caacgtgacaacacgttattaattaatacattaaaaacattacgcgatataggaaacaca
gtcatagttgtagaacatgatgaagaaactatcacaaatgcagattatgtagtagatata
ggtccaggagcaggacaaaatggaggttatgtaattgcaagtggtactccaaaagaaata
atggataatcataacagtataactggccaatatctcagtaacaaaaaaataatacctaac
ttcaaaaagcatagaactttttacaaatggatagaaatcattggagcacatgtaaacaat
ttacaaaacattgatgttaaaattcctttacatgcctttacttgcattactggagtatct
ggaagtggaaaatctagcttaataaacaatactctatatcaacatgcaactgatcaacta
aataatattaactgtatatacagtaaatgcacatctatatcaggattagaacatatagat
aaagtaattaaaatagaccagtcccctattggtagaacccctttatcaaattcagcaaca
tacacaggattatttacccatataaggtcatggtttgctgaattacctttatcaaaagaa
agaggatatactataagcaggttttcatttaactctaaaggaggaagatgtgaagcatgt
aaaggggatgggcaagtaaaaatagaaatgcattttttacctgatgtatatgtcaagtgt
gaacaatgcaaaggatcgcgttataacaaagagactctggaagtaacacatcaaggaaaa
tctatagctgacatattagatatgacagttgatcaagcatacgaattttttatccattta
ccattaatcaaagaaaaattagatgccttacgcagcgtaggcatgggctatattaaaata
ggacaaacatcgaatacattatcaggaggtgaagcacaaagaataaaattgtcaaaagaa
ctatcaaaacgttcaacaggaaaaacattgtatatattagatgaaccaactacaggatta
cattttgcagacatagataatttattacatgttctacataaattacgtgatttaggtaat
acaatagtagtaatagaacataatttacatgtcatcaaaacagcagaatacataatagat
ataggtcctaacggaggagatgatggaggtcaagtagtagctactgggactcctgaagaa
atagttcaaaaccctcatagcataactggacaatacttaaagccttatttaaatgcccaa
tcataa
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