Ehrlichia chaffeensis Saint Vincent: ECHSTV_0379
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Entry
ECHSTV_0379 CDS
T03348
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
echv
Ehrlichia chaffeensis Saint Vincent
Brite
KEGG Orthology (KO) [BR:
echv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
echv03032
]
ECHSTV_0379 (topA)
03400 DNA repair and recombination proteins [BR:
echv03400
]
ECHSTV_0379 (topA)
Enzymes [BR:
echv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ECHSTV_0379 (topA)
DNA replication proteins [BR:
echv03032
]
Prokaryotic type
DNA Topoisomerases
ECHSTV_0379 (topA)
DNA repair and recombination proteins [BR:
echv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ECHSTV_0379 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AHX08699
LinkDB
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Position
444533..446995
Genome browser
AA seq
820 aa
AA seq
DB search
MSLIIVESPSKAKTISKYLGSKYKVVASFGHIRDFPAKSGSVDPDKDFAMTYEIISKSEK
YVNKLIQVANKETQGIYLATDPDREGEAIAWHIIEVLKENNAIDDNVVINRMVFNEVTKS
AILESIKRPRSINMDLVYAQQARRALDYLVGFTLSPLLWRKLPGSKSAGRVQSVALRLIC
DRESDIEKFITQEYWDIEAKCCNTEGKQFSAFLSCYAGKKLEKFDIKNEEDAQKLSEEVR
SRSYSVINVEKKHTKRNPYPPFITSSLQQEASTKLGFTAKNTMLIAQKLYEGIDVGGEIV
GLITYMRTDGFYIADEALEHIRSIILSMFGKEYLPESARKYVKKVKNAQEAHEAIRPTNI
TITPGSLSNYLTPEQLKLYDLIWKRTVASQMNSAVIDQVIVELGSLDKVVTLRATGSSLF
FDGFYKVYGHGEDDDSKNNMLPLLQKNDKCPLDEVIPHQHFTNPPARYNEASLVKKMEEI
GIGRPSTYASIISVLQDRQYVILNQKRFFPTERGRIVNVFLVNFFSRYVEYDFTADLEEK
LDLISNGKINWKEVLHQFWFLFIDNVNSVKKLEFTEVLKVISCEMENYIFSSDKSESSRV
CPVCNDGTLELNISKNGIFLGCSKYPECKYTKNVGSGIVDDTDNTQYPKILGIDAATGQE
IYLKKGPYGLYLQIGNDKSGKRAAIPKNIDANLLDLQMAEKILSLPISLGTHPDTGQEIK
LGLGKFGAYILYGGKYFSVKNEHNFLDISIENAINIIANNSTSGVIKSLGITEDNKEVFL
CKGRYGFYLKYDKLNVALKKDTDIEQISLSDAIKLISEKL
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaattatagtagaatccccatctaaagcaaaaactataagtaaatatttaggt
agcaagtataaagttgttgcatcatttgggcatattagggattttccagcaaaaagtggt
tctgttgatccggataaagatttcgctatgacttatgaaattattagtaagtcagaaaaa
tatgtaaataagttaattcaggtagctaataaggaaacacaaggaatttatcttgcaact
gatccagatcgtgagggtgaagcaatagcatggcatattatagaagtattgaaggaaaat
aatgctattgatgataatgttgtaattaatagaatggtttttaatgaggtaactaaaagt
gctattcttgaatctataaaacgcccaagaagtatcaatatggatcttgtgtatgcacag
caagcacgtagagcattagattatttagttggttttacgttatctcctttattatggaga
aaacttccgggtagtaaatctgctggtagagttcaatctgttgctttaaggttaatatgt
gacagggaaagtgatattgaaaagttcattacacaagaatattgggatattgaggctaaa
tgttgcaatacagaaggtaagcagttttctgcatttttaagttgttatgctggtaaaaaa
ttagagaagtttgatattaagaatgaagaagatgcacaaaagttgtcagaagaagtaaga
tctcgtagttattctgttataaatgttgagaaaaagcatacaaagcgtaatccttatcct
ccttttattacatcaagtttacagcaagaagcatcaacaaagcttggatttactgcaaaa
aatactatgcttattgctcaaaaactgtatgaaggaattgatgttggaggggaaattgtt
ggactcattacttatatgaggacggatggattttatattgcagatgaagcattagagcat
attaggagtatcattctttctatgtttggtaaagaatatttaccggaatctgctcgcaag
tatgtgaaaaaggtaaaaaatgctcaagaagcacatgaagcaattagaccaacgaatatt
acaattactcctggtagtttatcaaattatctcactccagagcaactcaagctttatgat
cttatatggaaaaggactgttgcaagtcagatgaattctgctgtaattgatcaggttata
gtagaattagggtcgctggataaagtagtaactttgcgagccacaggttcttccttgttt
tttgatggattttataaggtgtatggtcatggtgaggatgatgatagtaaaaataatatg
ctaccgttacttcaaaaaaatgataaatgccctttagatgaagtgatacctcatcaacat
tttactaatcctcctgctagatataatgaagcaagtttagtgaagaaaatggaggaaata
gggataggaaggccttctacttatgcttctattatttctgtattgcaagatagacagtat
gttatactaaatcaaaaaagattttttccaacagagagaggtagaatagtaaatgttttt
cttgttaacttttttagtcgctatgtagaatatgattttactgctgaccttgaagaaaag
ttggatttaatctctaatgggaagattaattggaaggaagtactacatcaattctggttt
ctgtttattgataatgttaattcagtaaaaaaactagaatttactgaagtattaaaagtt
attagttgtgagatggaaaattatattttttcttctgataaatctgaatctagtagagta
tgtcctgtatgtaatgatggaacattagagcttaatattagtaagaatggtattttttta
ggatgttctaaatatccagagtgtaagtatacaaaaaatgttggaagtggtattgttgat
gatacagacaatacacaatatcctaaaatattaggtattgatgctgcaacaggacaagaa
atatatcttaaaaaaggtccgtatggtctctatttacagattggtaatgataaaagtggt
aaacgtgcagctattccaaaaaatatagatgctaatttattagatttgcaaatggcagaa
aaaatattaagtttacctataagcttaggtactcatccggatactggtcaagaaattaag
ttaggacttggtaagtttggtgcatacatattgtatggtggtaagtatttttcagtaaaa
aatgagcataattttttagatattagcattgaaaacgctattaatattattgcgaataat
tctacaagtggggttataaagtctctgggtatcactgaagataataaagaagtattctta
tgtaaaggaagatatggattctatttaaaatatgataagttgaatgttgctttgaagaaa
gatacagatattgaacaaatatctttatcggatgctattaagctcatatcagaaaaatta
taa
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