Ehrlichia chaffeensis Saint Vincent: ECHSTV_0399
Help
Entry
ECHSTV_0399 CDS
T03348
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
echv
Ehrlichia chaffeensis Saint Vincent
Pathway
echv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
echv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECHSTV_0399 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
echv03019
]
ECHSTV_0399 (pnp)
03016 Transfer RNA biogenesis [BR:
echv03016
]
ECHSTV_0399 (pnp)
Enzymes [BR:
echv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ECHSTV_0399 (pnp)
Messenger RNA biogenesis [BR:
echv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ECHSTV_0399 (pnp)
Transfer RNA biogenesis [BR:
echv03016
]
Prokaryotic type
tRNA degradation factors
ECHSTV_0399 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
KH-I_KHDC4-BBP
KH_N4BP1_2nd
S1_RRP5
KH_Vigilin
Motif
Other DBs
NCBI-ProteinID:
AHX08857
LinkDB
All DBs
Position
463717..466107
Genome browser
AA seq
796 aa
AA seq
DB search
MFNLIRRSAEWGGKTLVLESGKIARQASGAVMVSYAGTTVLATVVTGKTKEPVDFLPLTV
QFVAKSYAVGKIPGGFLKREGKPSDRETLISRLIDRSIRPLFPAGFYDEISIVCNLLSYD
TVTPPEVTALVGATAALSISGVPFNGLVVGARVGYLPSEGKYLLNASADEMLCSSLDLFL
SGNEDSVLMVESEASELSESQMLGAITFGHQHCQEVINLIKEFSHESGQTPIDFIPHDIS
SLVSDIESSYKEDFSLAYSNTIKKERVLKLEELRGKVLSEVADKYSAGDVECSDQDIVTA
LKTFERSLVRSKIIDTSSRIDGRAFDEIRDIEIEVDVLPKAHGSALFTRGNTQALVVTAL
GTPQDEQIVDDLDGDRRENFLLHYNFPPYAVGESAALRAPGRREIGHGKLAWRAIRYVLP
EKSDFPYTIRVVSEITESDGSSSMATVCGASLALMDTGVPIKSPVAGIAMGLIKEDDRFI
ILSDILGDEDHLGDMDFKVAGTAEGVTALQMDMKISGIDIDIIEKALLQAKDGRMHILSK
MNAVIQESRNRIKNHAPRIESIFINKDKIRNVIGSGGKNIRDICEKTGAKIEIIQDGTVM
IYAVNNEAVEYAKSMIMDIVTEPEIGKVFEGTVVEIMKFGAFVSFLGGKKGLVHISEIRN
EHISSVGSVISLNDKVKVLVIGIDREHIQLSMRRVDQESGEPIDGELYNIRKNSFSDDSC
GSTGGSSFKESYNPNSRHGSHEKKRSGGSSRSSRRNSNGPNYYREDLPSSNGFGNNNRSF
SNSRNGHDVPRKPRFF
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatttgataagaagatctgcagaatggggagggaaaaccttagttttagagagt
ggaaagatagcaagacaagctagtggtgccgttatggttagttatgccggtactacagtt
ttggcaacagtagtaacaggtaaaactaaggaaccggtagattttctaccattaactgta
cagtttgttgcgaagagttatgctgttggtaagattcctggtggttttttgaagagagaa
ggtaaaccatctgatagggagacgttgatttctcgtttaattgataggagtataagacct
ttatttcctgctggattttatgatgagattagtatagtgtgtaatttgctttcatatgat
actgtaacacctccagaggttacagcattagttggagcaactgcagctttatctatatct
ggtgttccttttaatggtttggttgttggtgcaagggttggctatttaccatctgaaggt
aagtatttattaaatgcatctgctgatgagatgctctgtagttctttagatttattttta
tcaggtaatgaagattctgttttgatggttgaatccgaggcatctgagttatctgaatct
cagatgttaggtgcaataacttttgggcatcaacattgtcaagaggttattaatttaatt
aaagaatttagtcatgaaagtggtcaaacacctattgacttcataccccatgatattagt
tcacttgtgagtgatatagagtcctcttataaagaggattttagtttagcatactctaac
actataaagaaagaaagggtattaaaattggaggaattgaggggtaaagtattgtctgaa
gtggcagataaatatagtgctggtgatgtggagtgtagtgatcaagatatagttactgca
ttaaaaacctttgaaagatcgttagtgagatccaaaattattgatacctcttctagaata
gatggccgtgcatttgatgagatacgtgatatagaaattgaagtggatgtattgcctaaa
gcgcatggttctgctttatttactcgagggaacacgcaagcattggttgttactgcatta
ggtacacctcaagatgagcagatagttgatgatttagatggtgatagaagagaaaatttt
ttgttacattataattttcctccgtatgcagttggtgagtctgcagctttacgtgctcct
ggtagaagagaaataggtcatggtaagcttgcgtggagggcaattcgttatgtattacct
gaaaagtcagattttccatatactattagagtagtttctgaaattacagagtcagatggt
tcttcttcaatggctacagtttgtggtgcgtctttggctttaatggatacaggtgtgcca
attaaatctcctgttgctggaattgcaatggggctcattaaagaagatgataggtttata
atactttcagatatattgggtgatgaagatcatcttggtgatatggattttaaagtagct
ggtactgctgaaggtgttactgctttacaaatggatatgaaaatatcgggtattgacatt
gatataattgaaaaagcattacttcaagctaaagatggtagaatgcatattttaagtaaa
atgaatgcagtgatacaagaatctcgcaatcgtataaaaaatcatgctcctaggatagaa
tctatttttataaataaggataagattcgtaatgtaataggaagtggaggaaaaaatata
cgtgatatatgtgaaaaaacaggtgcgaaaattgaaataatccaagatggcactgttatg
atatatgctgttaacaatgaggcagtagaatatgctaaaagcatgataatggatattgta
actgaaccagagataggtaaggtttttgaaggtactgttgttgaaattatgaagtttgga
gcttttgtcagcttcttgggtggtaagaaaggattagtacatattagtgaaataaggaat
gaacatattagttcagtaggtagtgttatttctttgaatgataaagtaaaagtgttagta
attggtatagatcgtgaacatatccaattatctatgcgcagagtagatcaggaaagtgga
gaacctatagatggtgagctttataatataaggaaaaatagtttttctgatgattcatgt
ggtagtactggtggtagtagttttaaggagagctataacccaaatagtagacatggtagt
catgaaaaaaaacgtagtggtggtagtagtagatcatcacgtcgtaacagtaatggacct
aactattatagagaagatttaccatcgtcaaacggatttgggaataataatcgctcattc
agtaatagtagaaatggtcatgatgttcctaggaagcctaggtttttttaa
DBGET
integrated database retrieval system
