Ehrlichia chaffeensis Wakulla: ECHWAK_1021
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Entry
ECHWAK_1021 CDS
T03364
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
echw
Ehrlichia chaffeensis Wakulla
Pathway
echw00300
Lysine biosynthesis
echw00470
D-Amino acid metabolism
echw01100
Metabolic pathways
echw01110
Biosynthesis of secondary metabolites
echw01120
Microbial metabolism in diverse environments
echw01230
Biosynthesis of amino acids
Module
echw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
echw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ECHWAK_1021 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ECHWAK_1021 (dapF)
Enzymes [BR:
echw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ECHWAK_1021 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
DUF5023
LeuA_dimer
Motif
Other DBs
NCBI-ProteinID:
AHX09320
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All DBs
Position
1155096..1155899
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AA seq
267 aa
AA seq
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MIDFIKMHGTSNDFVIIDCRKKSYSNINYKAIANRKTGIGCDQIIIITESEKADCFMHIY
NADGSKVEMCGNAARCVGYLLSNEKQDNNITIELSDRILSCLRTSENRVQVNIGVAKFHW
TDIPTSQECDTLHLPIELEMLSDPVGINVGNPHAIFFVDSIETIPLDKLGPKLENHHLFP
KRANISIAEIVSRDKIKLRVWERGTGETASCGSGACAALVAAIRRQYTNKTAVVCLQGGD
LLISYQHDNTILMEGMVSYIFNGIYRV
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgatagattttataaaaatgcatggaacctctaatgattttgtaatcatagattgtagg
aaaaaatcttatagtaacattaactataaagcaattgccaatagaaaaacaggtattggt
tgtgaccaaatcattattataacagaatctgaaaaagcagattgctttatgcacatatat
aatgcagatggaagcaaagttgaaatgtgcggaaatgctgcaagatgtgttggatactta
ttaagcaatgaaaaacaagataataatataacaattgaactatctgaccgtatattatca
tgtttaaggacatcggaaaatagagtacaagtcaacataggagtagcaaaattccattgg
acagatatacctacatctcaagaatgtgatactttgcacttacctatagaattagaaatg
ttaagcgatcctgtaggaataaatgtagggaatcctcatgcaatattttttgttgattcc
atagagacaattccactagataaactaggaccaaaactagaaaatcatcaccttttcccc
aaaagggcaaacattagtattgctgaaattgtatccagagataaaataaaacttagggtc
tgggaacgcggaactggggagacagcctcatgtggcagcggagcatgtgcagcattagtc
gcagcaataagacgtcaatacaccaacaagacagcagtcgtatgtttacaaggtggtgat
ttattaatatcataccaacatgataacactattttaatggaagggatggtatcatatata
ttcaatggcatttatcgtgtctaa
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