Escherichia coli O18 K1 H7 UTI89 (UPEC): UTI89_C0230
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Entry
UTI89_C0230 CDS
T00338
Symbol
dniR
Name
(GenBank) cytochrome c552
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
eci
Escherichia coli O18:K1:H7 UTI89 (UPEC)
Brite
KEGG Orthology (KO) [BR:
eci00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
eci01011
]
UTI89_C0230 (dniR)
Enzymes [BR:
eci01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
UTI89_C0230 (dniR)
Peptidoglycan biosynthesis and degradation proteins [BR:
eci01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
UTI89_C0230 (dniR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM_RLK
LysM3_LYK4_5
NMB0315_dom_I
LysM1_NFP_LYK
LysM_OapA
HTH_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
ABE05734
UniProt:
Q1RFY0
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All DBs
Position
complement(237565..238923)
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AA seq
452 aa
AA seq
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MKAKAILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQARWMDDGTSIAPDGDLW
AFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYMYWIAGQVKKRNMPMELVL
LPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNYDARRDVVASTTAALNMMQRL
NKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDFWSLPLPQETKQYVPKMLALSDI
LKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVADMAGISVSKLKTFNAGVKGSTLGAS
GPQYVMVPKKHADQLRESLASGEIAAVQSTLVADNTPLNSRVYTVRSGDTLSSIASRLGV
STKDLQQWNKLRGSKLKPGQSLTIGAGSSAQRLANNSDSITYRVRKGDSLSSIAKRHGVN
IKDVMRWNSDTANLQPGDKLTLFVKNNNMPDS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaaaagcgatattactcgcctctgtcctgctcgtgggttgccagagcaccggc
aacgttcaacagcacgcacagagcctttctgcagctggtcaaggggaagcagcaaagttt
acaagtcaggcacgatggatggacgatgggacgtctatcgcgccagatggtgacttgtgg
gctttcattggcgacgagctaaagatgggaattccggaaaacgaccggattcgcgaacag
aaacagaaatatttacgcaataagagctatctccacgatgtaactttacgggcagagccg
tatatgtactggatagccgggcaagttaaaaaacgtaacatgcctatggaactggtacta
ctacccatagtggagagcgcttttgatcctcacgcaacgtctggcgccaatgccgcgggc
atctggcagatcattccgagcacggggcgcaattatggtttgaaacagacacgcaattat
gacgcgcgtcgcgatgttgttgcttcaacaactgccgcgctgaacatgatgcagcgtctg
aacaagatgtttgacggcgactggcttctgaccgtagcggcttataacagcggcgaaggt
cgggtcatgaaggcaattaaaacgaacaaagcgcgtgggaaatccacggacttctggtcg
ttaccgttgccgcaggaaacgaagcagtacgtgcctaaaatgctggcattgagtgatatt
ctcaaaaacagcaagcgttatggcgtacgtctgccaacgaccgatgaaagccgtgctctg
gcgcgtgtgcacctgagcagcccggttgaaatggcgaaggttgcagatatggcggggatt
tccgtcagcaagctgaagacattcaacgctggcgtgaaaggctccacgctgggcgcaagt
ggtccgcagtacgtgatggtgccaaagaagcatgcagatcaactgcgtgaatctctggct
tcgggcgaaattgctgctgtacagtcgacgctggttgccgacaatacgccgcttaacagc
cgtgtttacaccgtacgctctggcgacacgctttcaagtatcgcttcacgtctcggcgtt
agcaccaaagatttgcagcagtggaacaaactgcgcggatctaagctgaagccaggccaa
agcttgacgattggcgcaggtagtagcgcacagcggttggcaaacaacagcgatagcatt
acgtatcgtgtgcgcaaaggcgattcgctttcaagcattgctaaacgccacggcgtgaac
atcaaagatgtgatgcgctggaacagcgatactgcgaatctgcaaccaggcgataagctg
acgttgtttgtgaaaaacaacaacatgccagattcctga
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