Escherichia coli O18 K1 H7 UTI89 (UPEC): UTI89_C0532
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Entry
UTI89_C0532 CDS
T00338
Symbol
ybbB
Name
(GenBank) putative capsule anchoring protein YbbB
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
eci
Escherichia coli O18:K1:H7 UTI89 (UPEC)
Brite
KEGG Orthology (KO) [BR:
eci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eci03016
]
UTI89_C0532 (ybbB)
Enzymes [BR:
eci01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
UTI89_C0532 (ybbB)
Transfer RNA biogenesis [BR:
eci03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
UTI89_C0532 (ybbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
T2SSE
AAA_18
AAA_16
AAA_23
DUF3333
AAA_22
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABE06033
UniProt:
Q1RF31
LinkDB
All DBs
Position
complement(540873..541967)
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AA seq
364 aa
AA seq
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MQERHTEQDYRALLIADTPIIDVRAPIEFEQGAMPAAINLPLMNNDERAAVGICYKQQGS
DAALALGHKLVAGEIRQQRMDAWRAACLQNPHGILCCARGGQRSHIVQRWLHDAGIDYPL
VEGGYKALRQTAIQATIELSQKPIVLIGGCTGCGKTLLVQQQPNGVDLEGLARHRGSAFG
RTLQPQLSQASFENLLAAEMLKTDARQNLRLWVLEDESRMIGSNHLPECLRERMTQATIA
VVEDPFEIRLERLNEEYFLRMHHDFTHAYGDEQGWQEYCEYLHHGLSAIKRRLGLQRYNE
LAARLDAALTTQLTTGSTDGHLAWLVPLLEEYYDPMYRYQLEKKAEKVVFRGEWAEVAEW
VKAQ
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagagacacacggaacaggactatcgtgccctgctgattgctgatacgcccatt
attgatgttcgcgcccccatcgagtttgagcaaggcgcaatgcccgccgctatcaacctg
ccgttaatgaataacgatgaacgcgccgccgttggcatctgctataaacagcaagggtca
gacgcggcgctggcactggggcataaactggtggcgggtgaaattcgtcagcagcgcatg
gacgcctggcgggcagcgtgcctgcaaaatccgcacggtattctctgctgcgcccgtggc
ggtcagcgctcgcatattgtgcaacgctggctgcatgacgcggggattgattatccgctg
gtggaaggcggttataaggcactgcgccagaccgcgattcaggcgaccattgaactgtca
caaaaaccgatagtgctgattggcggttgtaccggctgcggcaaaacgctgttagtgcaa
caacaaccgaacggtgttgatctggaagggctggcgcgccatcgcggttctgcttttggt
cgcacgttacaaccacaacttagccaggcgagttttgaaaacctgctggctgccgaaatg
ctaaaaaccgacgcccgtcagaatttgcgcttgtgggtgctggaagatgaaagccggatg
atcggttcgaatcacctgccggaatgtctgcgcgaacgaatgactcaggcgacgattgcg
gtggtagaagatccgtttgagatccgtcttgaacgcctgaacgaagagtatttcttgcgt
atgcatcatgattttacccacgcttatggcgacgaacagggctggcaggagtattgcgaa
tacctgcatcacgggctttcggcgattaaacgtcggctgggactacaacgctataacgaa
ctggctgcaaggctggatgcggcgctgacaacgcaactcaccaccggcagcaccgacggt
catctggcctggctagtgccgctgcttgaagaatattacgacccgatgtatcgctatcag
cttgaaaaaaaagcggaaaaagttgtctttcgcggtgagtgggcggaagtggcggaatgg
gttaaggcgcagtga
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