KEGG   Escherichia coli O18 K1 H7 UTI89 (UPEC): UTI89_C2888
Entry
UTI89_C2888       CDS       T00338                                 
Symbol
rnc
Name
(GenBank) RNase III, ds RNA
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
eci  Escherichia coli O18:K1:H7 UTI89 (UPEC)
Pathway
eci03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:eci00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    UTI89_C2888 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eci03019]
    UTI89_C2888 (rnc)
   03009 Ribosome biogenesis [BR:eci03009]
    UTI89_C2888 (rnc)
   03036 Chromosome and associated proteins [BR:eci03036]
    UTI89_C2888 (rnc)
Enzymes [BR:eci01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     UTI89_C2888 (rnc)
Messenger RNA biogenesis [BR:eci03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     UTI89_C2888 (rnc)
Ribosome biogenesis [BR:eci03009]
 Eukaryotic type
  90S particles
   RNase
    UTI89_C2888 (rnc)
 Prokaryotic type
  rRNA processing factors
   UTI89_C2888 (rnc)
Chromosome and associated proteins [BR:eci03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     UTI89_C2888 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DSRM_2 RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: ABE08348
UniProt: Q1R8G6
LinkDB
Position
complement(2845130..2845810)
AA seq 226 aa
MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR
GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq 681 nt   +upstreamnt  +downstreamnt
atgaaccccatcgtaattaatcggcttcaacggaagctgggctacacttttaatcatcag
gaactgttgcagcaggcattaacccatcgtagcgccagcagcaaacataacgagcgttta
gaatttttaggcgactctattctgagctacgttatcgccaacgcgctttatcaccgtttc
cctcgtgtcgatgaaggcgatatgagccggatgcgcgccacgctggtccgtggcaatacg
ctggcagaactggcgcgcgaatttgagttaggcgagtgcttacgtttagggccaggtgaa
cttaaaagcggtggatttcgtcgtgagtcaattctcgccgacaccgtcgaagcattaatt
ggtggcgtattcctcgacagtgatattcaaaccgtcgagaaattaatcctcaactggtat
caaacccgtctggacgaaattagcccaggagataaacaaaaagatccgaaaacgcgcttg
caagaatatttgcagggtcgccatctgccgctgccgacttatctggtagtccaggtacgt
ggcgaagcgcacgatcaggaatttactatccactgccaggtcagcggcctgagtgaaccg
gtggttggcacaggttcaagccgtcgtaaggctgagcaggctgccgccgaacaggcgttg
aaaaaactggagctggaatga

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