Escherichia coli O18 K1 H7 UTI89 (UPEC): UTI89_C3071
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Entry
UTI89_C3071 CDS
T00338
Symbol
ygaA
Name
(GenBank) hypothetical sigma-54-dependent transcriptional regulator ygaA
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
eci
Escherichia coli O18:K1:H7 UTI89 (UPEC)
Brite
KEGG Orthology (KO) [BR:
eci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eci03000
]
UTI89_C3071 (ygaA)
Transcription factors [BR:
eci03000
]
Prokaryotic type
Helix-turn-helix
Other families
UTI89_C3071 (ygaA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
GAF_2
Mg_chelatase
AAA_5
MCM
AAA
GAF_3
AAA_16
AAA_2
AAA_19
AAA_22
HTH_8
AAA_30
DBD_HTH
Motif
Other DBs
NCBI-ProteinID:
ABE08523
UniProt:
Q1R7Z1
LinkDB
All DBs
Position
complement(2989169..2990683)
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AA seq
504 aa
AA seq
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MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALLRYDSRQFIPLAIDGLA
KDVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLIPGQESLKVHACVGLPLFA
GQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNALLIEQLESQNMLPGDAAPFE
AVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRAVNPLV
YLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLL
RVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFPLSVPPLRE
RGDDVILLAGYFCEQCRLRLGLSRVVLSAGARNLLQHYNFPGNVRELEHAIHRAVVLSRA
TRSGDEVILEAQHFAFPEVTLPPPEAAAVPVVKQNLREATEAFQRETIRQALAQNHHNWA
ACARMLETDVANLHRLAKRLGLKD
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttccgttgatgtgctggcgaatatcgccatcgaattgcagcgtgggattggt
catcaggatcgttttcagcgcctgatcaccacgctgcgtcaggtgctggagtgcgatgcg
tctgcgttgctacgttacgactcgcggcagtttattccgcttgccatcgacgggctggcg
aaggatgtactcggtagacgctttgcgctggaaggtcatccacggctggaagcgattgcc
cgcgcgggtgatgtggtgcgctttcccgcagacagcgaattgcccgatccttatgacggt
ttgattccagggcaggagagtctgaaggttcacgcctgcgttggtttgccgttgtttgcc
gggcaaaacctgatcggtgccttgacgctcgacgggatgcagcccgatcagttcgatgtt
ttcagcgacgaagagctacggctgattgccgcactggcggcgggagcgttaagcaatgca
ttgctgattgaacaactggaaagccagaatatgctgccaggcgatgccgcgccgtttgaa
gcggtgaaacagacgcagatgattggtttgtcccctggcatgacgcaattgaaaaaagag
attgagattgtggcggcatccgatctcaacgttttaattagcggtgagacgggaaccggt
aaggagctggtggcgaaagcgattcatgaagcctcgccacgggcggtgaatccgctggtc
tatctcaactgtgccgcactgccggaaagtgtggcggaaagtgagttgttcgggcatgtg
aaaggggcgtttactggtgctatcagtaaccgcagcgggaagtttgaaatggcggataac
ggcacgctgtttctcgatgagatcggcgagttgtcgttggcattgcaggccaagctgctg
agggtgttgcagtatggcgatattcaacgcgttggcgatgaccgcagtttgcgggtcgat
gtgcgcgtgctggcggcgactaaccgtgacttacgcgaagaggtactggcagggcgattt
cgcgctgacttgttccaccgcctgagcgtgtttccactttcagtgccgccgctgcgtgag
cggggcgatgatgtcattctgctggcggggtatttctgcgagcagtgtcgtttgcggctg
gggctctcccgcgtggtattaagtgccggagcgcgaaatttactgcaacactacaatttt
ccgggaaacgtgcgcgaactggaacatgctattcatcgggcggtagtattgtcgagagcc
acccgcagcggcgatgaagtgattcttgaggcgcaacattttgcttttcctgaggtgacg
ttgccgccgccagaagcggcggcggtgcccgttgttaagcaaaacctgcgtgaagcgaca
gaagcgttccagcgtgaaaccattcgtcaggcactggcgcaaaatcatcacaactgggcc
gcctgtgcgcggatgctggaaaccgacgtcgccaacctgcatcggctggcgaaacgtctg
gggctgaaggattaa
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