Escherichia coli O18 K1 H7 UTI89 (UPEC): UTI89_C3111
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Entry
UTI89_C3111 CDS
T00338
Symbol
rpoS
Name
(GenBank) sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
eci
Escherichia coli O18:K1:H7 UTI89 (UPEC)
Pathway
eci02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
eci00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
UTI89_C3111 (rpoS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eci03021
]
UTI89_C3111 (rpoS)
Transcription machinery [BR:
eci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UTI89_C3111 (rpoS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ABE08563
UniProt:
Q1R7V1
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All DBs
Position
complement(3028743..3029771)
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AA seq
342 aa
AA seq
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MFRQGITGRSHLMSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEELLSQ
GATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARR
YGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLP
IHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGG
DSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATL
EDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtcaagggatcacgggtaggagccaccttatgagtcagaatacgctgaaagtt
catgatttaaatgaagatgcggaatttgatgagaacggagttgaggtttttgacgaaaag
gccttagtagaagaggaacccagtgataacgatttggccgaagaggaactgttatcgcag
ggagccacacagcgtgtgctggacgcgactcagctttaccttggtgagattggttattca
ccactgttaacggccgaagaagaagtttattttgcgcgtcgcgcactgcgtggagatgtc
gcctctcgccgccggatgatcgagagtaacttgcgtctggtggtaaaaattgcccgccgt
tatggcaatcgtggtctggcgttgctggacctgatcgaagagggcaacctggggctgatc
cgcgcggtagagaagtttgacccggaacgtggtttccgcttctcaacatacgcaacctgg
tggattcgccagacgatcgaacgggcgattatgaaccaaacccgtactattcgtttgccg
attcacatcgtaaaggagctgaacgtttacctgcgaaccgcacgtgagttgtcccataag
ctggaccacgaaccaagtgcggaagagatcgcagagcaactggataagccagttgatgac
gtcagccgtatgcttcgtcttaacgagcgcattacctcggtagacaccccgctgggtggt
gattccgaaaaagcgttgctggacatcctggccgatgaaaaagagaatggtccggaagat
accacgcaagatgacgatatgaagcagagcatcgtcaaatggctgttcgagctgaacgcc
aaacagcgtgaagtactggcacgtcgattcggtttgctggggtacgaagcggcaacactg
gaagatgtaggtcgtgaaattggcctcacccgtgaacgtgttcgccagattcaggttgaa
ggcctgcgccgtttgcgcgaaatcctgcaaacgcaggggctgaatatcgaagcgctgttc
cgcgaataa
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