Escherichia coli O18 K1 H7 UTI89 (UPEC): UTI89_C3221
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Entry
UTI89_C3221 CDS
T00338
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
eci
Escherichia coli O18:K1:H7 UTI89 (UPEC)
Pathway
eci03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UTI89_C3221 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eci03400
]
UTI89_C3221 (recB)
Enzymes [BR:
eci01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
UTI89_C3221 (recB)
DNA repair and recombination proteins [BR:
eci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UTI89_C3221 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
Cas_Cas2CT1978
BscB_a-b
Motif
Other DBs
NCBI-ProteinID:
ABE08670
UniProt:
Q1R7J4
LinkDB
All DBs
Position
complement(3142897..3146448)
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AA seq
1183 aa
AA seq
DB search
MKRMSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVE
ELLVVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYKRLLEEIDDKAQAAQWLLLA
ERQMDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPR
EIAQVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETLASRHAQIVARIDAVKQQWR
DAVGELDALIESSGIDRRKFNRSNQAKWIEKISAWAEEETNSYQLPESLEKFSQRFLEDR
TKAGGETPRHPLFEAIDQLLAEPLSIRDLVITRALAEIRETVAREKRRRGELGFDDMLSR
LDSALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWHHQPETALLLIGDPKQ
AIYAFRGADIFTYMKARSEVHAHYTLDTNWRSAPGMVNSVNKLFSQTDDAFMFREIPFIP
VKSAGKNQALRFVFKGETQPAMKMWLMEGESCGVGDYQSTMAQVCAAQICDWLQAGQRGE
ALLMNGDDARPVRASDISVLVRSRQEAAQVRDALTLLEIPSVYLSNRDSVFETLEAQEML
WLLQAVMTPERENTLRSALATSMMGLNALDIETLNNDEHAWDAVVEEFDGYRQIWRKRGV
MPMLRALMSARNIAENLLATAGGERRLTDILHISELLQEAGTQLESEHALVRWLSQHILE
PDSNASSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFITNFRVQDQAFYHDRHSFEAV
LDLNAAPESVDLAEAERLAEDLRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSA
LGRLLQKGEPQDAAGLRTCIEALCNDDIAWQTAQIGDNQPWQVNDALTAELNARTLQRLP
GDNWRVTSYSGLQQRGHGIAQDLMPRLDVDAAGVVSVVEEPTLTPHQFPRGASPGTFLHS
LFEDLDFTQPIDPNWVQEKLELGGFEPQWELVLTEWITAVLQAPLNETGVSLNQLSDRDK
QVEMEFYLPISEPLIASQLDALIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYY
LLDYKSNWLGEDSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYERHFGG
VIYLFLRGVDKEHPQQGIYATRPNAGLIDLMDEMFASMTLEEA
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaagaatgagtgatgtcgccgagacactagatcctttgcgcttgcccttacagggc
gagcgcctgattgaagcctctgccggcacaggcaaaacctttacgattgcggcgctctat
ttgcgcctgttacttggactaggcggttctgccgcctttccccgcccgctgaccgttgaa
gaactgctggtggtgacctttaccgaggctgctacggcagaattgcgtggtcgtatccgt
agcaatatccacgagttgcgcatcgcctgtctgcgtgaaaccaccgacaatccactgtac
aaacgcctgctggaagagatcgacgataaagcgcaagccgcgcagtggttgttgttagcc
gagcggcagatggatgaagcggcagtctttactattcacggcttttgccagcgcatgctc
aacctgaatgcctttgaatccggcatgctgtttgagcagcagctgattgaagatgagtct
ctgctacgctaccaggcctgcgccgatttctggcgtcgccactgctacccgctgccgcgt
gaaattgcccaggtcgtctttgaaacctggaaagggccgcaggcgttgctgcgcgatatt
aatcgttatctgcaaggcgaagcgccggttatcaaagcaccgccccccgatgatgaaacg
ctggcttcccgccacgcgcaaattgtggcgcgtattgatgccgtaaaacagcagtggcgc
gacgcagtgggtgaactggatgcgctgatcgaatcttctggtattgatcgacgcaagttt
aaccgtagcaatcaggctaaatggatcgagaagatcagcgcctgggcagaagaagagacc
aacagctatcagttgccggagtcgctggaaaaattctctcagcgtttcttagaagatcgc
acgaaagccgggggggaaaccccgcgacatccactgtttgaggcgatcgatcaactgctt
gcagaaccattgtcgatccgcgatctggtgatcactcgcgcattggctgagatccgcgaa
acagtagcgcgtgaaaaacgccgccgtggcgaattgggttttgatgacatgttaagtcgg
ctcgattccgcgctgcgtagtgaaagcggcgaggtattggcagcggcgatccgtacgcga
ttcccggtggcaatgatcgatgaatttcaggataccgacccccaacagtatcgaattttt
cgccgtatctggcaccatcagccggaaaccgcattgttgctgattggcgacccgaaacag
gccatatatgcattccggggtgcggatatcttcacttatatgaaggcgcgtagcgaagtt
catgctcactacaccttagataccaactggcgttccgcaccgggaatggtgaacagcgtt
aacaaacttttcagccagactgatgacgcgttcatgtttcgtgaaataccgtttattcct
gtgaaatctgccggcaaaaatcaggcgttacgttttgtatttaaaggtgaaacgcagcct
gcgatgaaaatgtggctgatggaaggcgaaagctgcggcgttggcgactatcaaagtacc
atggcgcaggtatgtgctgcgcaaatctgcgactggctacaagccgggcaacgcggcgaa
gcgttgctgatgaacggcgacgatgcgcgtccggtgcgtgcttcggacatcagtgtgctg
gtgcgcagccgccaggaggccgctcaggtgcgcgatgccttaacgctgctggaaatccct
tccgtttacctttcgaaccgcgacagtgtttttgaaactctggaagcacaggagatgctt
tggctgttgcaggcggtgatgacgcccgaacgtgagaacaccctgcgcagtgcgctggca
acgtcaatgatggggctgaatgcgctggatattgaaacgctgaataatgacgaacatgcg
tgggatgcggtcgtcgaagagttcgatggttatcggcaaatctggcgcaaacgtggcgtt
atgccgatgctgcgggcgctgatgtcggcgcgtaacattgcagaaaacttgctggcaacg
gcaggcggtgagcggcgtcttaccgatatcttgcatatcagcgaactgctacaagaagcc
ggaacgcagctggaaagtgaacatgcgctggtacgctggttatcgcaacatatcctcgag
ccagacagtaatgcctccagccaacaaatgcgcctcgaaagtgataaacatctggtgcag
attgtcacgatacacaaatcaaaagggctggaatatccgctggtctggttgccatttatt
accaatttccgcgtccaggatcaggcgttttatcacgatcgccactcgtttgaggccgtt
ctggatcttaatgctgcgccagaaagcgtcgacctcgcggaggccgaacgtctggcggaa
gatctgcgtttgctttacgtggcgctgacgcgttcggtttggcattgcagtctcggcgtt
gcaccgctggtgcgccgtcgtggcgataaaaaaggtgataccgacgtccaccaaagtgcg
ctcgggcgtttgctgcaaaaaggagaaccgcaagatgcggcagggcttcgtacctgtatt
gaagcgttgtgcaatgatgatattgcctggcaaacggcacaaattggtgataaccagccc
tggcaggttaatgatgcattaactgcagaactgaatgcgaggacgctacaacgattgccc
ggcgataactggcgtgtcaccagctactccggtttgcagcagcgtggtcacggtatcgct
caggatctgatgccacggctggatgttgatgccgcaggcgtggtcagcgtcgttgaagaa
ccgacgttaacaccgcatcagttcccgcgcggtgcgtcaccggggacattcttgcacagt
ttgtttgaagacctcgattttacccagccgattgacccgaactgggtacaggaaaaactg
gagctcggtggctttgaaccgcagtgggaactggtgttgactgagtggatcacggctgtc
ctccaggcacctctcaatgaaacgggtgttagcctgaatcagctttccgatcgcgataaa
caggtggagatggagttttacctgccgattagtgaaccgcttatcgccagccagcttgat
gcactaattcgccagtttgacccgctatccgctggctgcccgccgctggagttcatgcag
gtacgtggcatgttaaaaggctttatcgatctggtgttccgccacgaagggcgttattac
ctgctcgactataaatccaactggttgggtgaagacagttcggcttacacccaacaggct
atggcagcggcaatgcaggcacaccgctatgatctgcaatatcagctttataccctggcg
ctgcaccgttatctgcgccatcgtattgctgattacgactatgagcgccactttggcggc
gttatttatctgttcctgcgtggcgttgataaagaacatccgcaacaagggatctacgcg
acccgacccaacgccgggttgattgacctgatggatgagatgtttgccagtatgaccctg
gaggaggcgtaa
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