Escherichia coli O18 K1 H7 UTI89 (UPEC): UTI89_C3590 Help Entry UTI89_C3590       CDS       T00338                                  Symbol deaD Name (GenBank) Cold-shock DEAD-box protein A   KO K05592   ATP-dependent RNA helicase DeaD [EC:5.6.2.7] Organism eci  Escherichia coli O18:K1:H7 UTI89 (UPEC) Pathway eci03018   RNA degradation Brite KEGG Orthology (KO) [BR:eci00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     UTI89_C3590 (deaD)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:eci03019]     UTI89_C3590 (deaD)    03009 Ribosome biogenesis [BR:eci03009]     UTI89_C3590 (deaD) Enzymes [BR:eci01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      UTI89_C3590 (deaD) Messenger RNA biogenesis [BR:eci03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      UTI89_C3590 (deaD) Ribosome biogenesis [BR:eci03009]  Prokaryotic type   rRNA helicases    UTI89_C3590 (deaD) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C DbpA DeaD_C ResIII CMS1 AAA_22 Cas3-like_C_2 DRTGG Motif Other DBs NCBI-ProteinID:  ABE09036 UniProt:  Q1R6H8 LinkDB All DBs Position complement(3525806..3527761) Genome browser AA seq 651 aa AA seqDB search MLINFMMSYVDWPPLILRHTYYMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIP HLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFS KHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEA DEMLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRP DISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGD MNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGR AGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESS DLDQYRALLSKIQPTAEGEELDLETLAAALLKMAQGERTLIVPPDAPMRPKREFRDRDDR GPRDRNDRGPRGDREDRPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRY IGNIKLFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPHTGGERRGGGRGF GGERREGGRNFSGERREGGRGDGRRFSGERREGRAPRRDDSTGRGRFGGDA NT seq 1956 nt NT seq  +upstreamnt  +downstreamnt ttgctgatcaatttcatgatgagttatgtagactggccgccattaattttgaggcacacg tactacatggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatcctt gaagcccttaacgatctgggttacgaaaaaccatctccaattcaggcagagtgtattcca catctgctgaatggccgcgacgttctgggtatggcccagacggggagcggaaaaactgca gcattctctttacctctgctgcagaatcttgatcctgagctgaaagcaccacagattctg gtgttggcaccgacccgcgaactggcggtacaggttgctgaggcaatgacggatttctct aaacacatgcgcggcgtaaacgtggttgccctgtacggcggccagcgttatgacgtgcaa ttacgcgccctgcgtcaggggccgcagattgttgtcggtactccgggccgtctgctggac cacctgaaacgtggcactctggacctctctaaattgagcggtctggttctggatgaagct gacgaaatgctgcgcatgggcttcatcgaagacgttgaaaccattatggcgcagatcccg gaaggtcatcagaccgctctgttctctgcaaccatgccggaagcgattcgtcgcattacc cgccgctttatgaaagagccgcaggaagtgcgcattcagtccagcgtgactacccgtcct gacatcagccagagctactggactgtctggggtatgcgtaaaaacgaagcactggtacgt ttcctggaagcggaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgact ctggaagtggcagaagctcttgagcgtaacggctacaacagcgccgcgctgaacggtgac atgaaccaggcgctgcgtgagcagacactggaacgcctgaaagatggtcgtctggacatc ctgattgcgaccgacgttgcagcccgtggcctggacgttgagcgtatcagcctggtggtt aactacgatatcccgatggattctgagtcttacgttcaccgtatcggtcgtaccggtcgt gcaggtcgtgctggtcgtgcactgctgttcgttgagaaccgtgagcgtcgtctgctgcgc aacatcgaacgcaccatgaagctgaccattccggaagtagaactgccgaacgcagaactg ctgggcaaacgtcgtctggaaaaatttgccgctaaagtacagcagcagctggaaagcagc gatctggatcaataccgtgcactgctgagcaaaattcagccgactgccgaaggtgaagag ctggatctcgaaactctggcagccgcactactgaaaatggcacagggtgaacgtactctg attgttccgccagatgcgccgatgcgtccgaaacgtgaattccgtgaccgtgatgaccgt ggtccgcgcgatcgtaacgaccgtggcccgcgtggcgaccgtgaagatcgtccgcgtcgt gaacgtcgtgatgttggcgatatgcagctgtaccgtattgaagtgggccgcgatgatggt gttgaagttcgtcatatcgttggcgcgattgctaacgaaggtgacatcagcagccgttac atcggtaacatcaagctgtttgcttctcactccaccatcgaactgccgaaaggtatgccg ggtgaagtgctgcaacactttacgcgtactcgcattctcaacaagccgatgaacatgcag ttgctgggcgatgcacagccgcatactggtggtgagcgtcgtggcggtggtcgtggtttc ggtggcgaacgtcgtgaaggcggtcgtaacttcagcggtgaacgccgtgaagggggtcgt ggtgatgggcgtcgttttagcggcgaacgtcgtgaaggccgcgcaccgcgtcgtgatgac tctaccggtcgtggtcgtttcggtggtgatgcgtaa

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