Escherichia coli O18 K1 H7 UTI89 (UPEC): UTI89_C4372
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Entry
UTI89_C4372 CDS
T00338
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
eci
Escherichia coli O18:K1:H7 UTI89 (UPEC)
Pathway
eci00300
Lysine biosynthesis
eci00470
D-Amino acid metabolism
eci01100
Metabolic pathways
eci01110
Biosynthesis of secondary metabolites
eci01120
Microbial metabolism in diverse environments
eci01230
Biosynthesis of amino acids
Module
eci_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
eci00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
UTI89_C4372 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
UTI89_C4372 (dapF)
Enzymes [BR:
eci01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
UTI89_C4372 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ABE09789
UniProt:
Q1R4C5
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Position
4258102..4258929
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AA seq
275 aa
AA seq
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MMQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH
YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNMG
EPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETLGPVL
ESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLAEEVR
VELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagttctcgaaaatgcatggccttggcaacgattttatggtcgtcgacgcggta
acgcagaatgtctttttttcaccggagctgattcgtcgcctggcggatcggcacctgggg
gtagggtttgaccaattgctggtggttgagccgccgtatgatcctgaactggattttcac
tatcgcattttcaatgctgatggcagtgaagtggcgcagtgcggcaacggcgcgcgctgc
tttgcccgttttgtgcgcctgaaagggctgaccaataagcgcgatatccgcgtcagcacc
gccaacgggcggatggttctgaccgtcaccgatgatgatctggtccgcgtaaatatgggc
gaacccaacttcgaaccttccgccgtgccgtttcgcgctaacaaagcggaaaagacctat
attatgcgcgccgccgagcagacaatcttatgcggcgtggtgtcgatgggaaatccacat
tgcgtgattcaggtcgatgatgtcgataccgctgcggtagaaacgcttggtcctgttctg
gaaagccacgaacgtttcccggagcgcgccaatatcggttttatgcaagtggttaagcgc
gagcatattcgtttacgcgtttatgagcgtggggcaggagaaacccaggcctgcggcagc
ggcgcgtgtgcggcggttgcagtagggatccagcaaggtttgctggccgaagaagtacgc
gtggagctccccggcggtcgtcttgatatcgcctggaaaggtccgggtcacccgttatat
atgactggcccggcggtacatgtctacgacggatttattcatctatga
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