Escherichia coli O18 K1 H7 UTI89 (UPEC): UTI89_C4376
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Entry
UTI89_C4376 CDS
T00338
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
eci
Escherichia coli O18:K1:H7 UTI89 (UPEC)
Pathway
eci03420
Nucleotide excision repair
eci03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eci00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UTI89_C4376 (uvrD)
03430 Mismatch repair
UTI89_C4376 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eci03400
]
UTI89_C4376 (uvrD)
Enzymes [BR:
eci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UTI89_C4376 (uvrD)
DNA repair and recombination proteins [BR:
eci03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UTI89_C4376 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
UTI89_C4376 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABE09793
UniProt:
Q1R4C1
LinkDB
All DBs
Position
4261272..4263488
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AA seq
738 aa
AA seq
DB search
MAEGVALLRPTYFYAAVPMDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHR
IAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHH
MDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSY
GNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEF
QDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQN
YRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQD
NGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRN
DDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFM
ELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYN
EEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPS
QMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVE
EVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAF
QGQGIKWLVAAYARLETV
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
ttggcggagggcgttgcgcttctccgcccaacctatttttacgcggcggtgccaatggac
gtttcttacctgctcgacagccttaatgacaaacagcgcgaagcggtggccgcgccacgc
agcaaccttctggtgctggcgggcgcgggcagtggtaagacgcgcgtactggtgcatcgt
atcgcctggctgatgagcgtggaaaactgctcgccatactcgattatggcggtaacgttt
accaacaaagcggcggcggagatgcgtcatcgtatcgggcagctgatgggcaccagccag
ggcggcatgtgggtcggcaccttccacgggctggcgcaccgtctgctgcgtgcgcaccat
atggacgccaatctgccgcaggattttcagatcctcgacagcgaggaccagctacgcctg
ctcaaacgcctaatcaaggcgatgaacctcgacgagaagcagtggccgccgcgccaggca
atgtggtacatcaacagccagaaagatgaggggctgcgtccgcatcatattcagagctac
ggtaatccggtggagcagacctggcagaaggtgtatcaggcgtatcaggaagcgtgtgac
cgcgcgggcctggtggacttcgccgagctgctgctacgtgctcacgagttgtggcttaac
aagccgcatatccttcagcactatcgcgaacggtttaccaatatcctggtggacgaattc
caggataccaacaacattcagtatgcgtggatccgactgctggcaggcgatactggcaaa
gtgatgatcgttggcgatgacgaccagtcaatctacggctggcgcggagcgcaggtggag
aatattcagcgtttcctcaatgatttccccggtgctgaaactatccgtctggagcagaac
taccgctctaccagcaatattctgagcgccgctaacgccctgattgaaaacaataacggg
cgtctgggtaaaaaactgtggaccgatggcgcggacggtgagcctatttccctctattgc
gcttttaacgaactcgacgaagcgcgttttgtggttaaccgcatcaaaacctggcaggac
aacggcggggcgcttgccgagtgcgccattctctaccgcagcaacgcccagtcgcgtgtg
ctggaagaggcgttattgcaggcgagtatgccgtatcgtatttacggcgggatgcgcttc
ttcgaacgccaggaaatcaaagatgcgctctcgtatctgcgcctgattgccaaccgcaac
gacgacgcggcctttgagcgtgtggttaatacgccaacgcggggtattggtgaccggacg
ctggacgtggtacgtcagacatcgcgcgatcgccagttaacactctggcaggcatgtcgt
gaactgttgcaggaaaaagccctcgccggacgtgctgccagcgccttacagcggtttatg
gagctgatcgacgccttagcgcaggaaactgccgatatgccgctgcatgtacagactgac
cgggtaattaaagactccggcctgcgcaccatgtacgagcaggagaagggcgaaaaaggt
cagacgcgtatcgaaaacttagaggaactggtgacggcaacgcgccagttcagctacaac
gaagaagacgaagatttaatgccgctgcaggcattcctctcccatgcggcgctggaagcg
ggcgaggggcaggcggatacctggcaggacgcggtgcagttgatgacgctacactcggcg
aaaggtctggaattcccgcaggtgtttatcgttggtatggaagagggcatgttcccaagc
cagatgtcgctggatgaaggcgggcgtctggaagaagaacgccgtctggcctacgttggc
gtaacccgcgcgatgcagaaactgacgctgacctacgcggaaacccgccgtctatatggc
aaagaggtttaccatcgcccgtcgcgctttatcggtgagttgccggaagagtgtgtggaa
gaggtgcgcctgcgcgccacggtaagccgcccggtcagccatcaacggatggggacgccg
atggtcgagaacgacagcggctacaagctcggccagcgcgtacgccacgctaagtttggt
gaaggcaccatcgtcaatatggaaggcagcggtgagcatagccgtttgcaggtggcgttc
cagggccagggtattaaatggctggtggcggcttacgcccggttggagacggtgtga
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