KEGG   PATHWAY: ecj03010
Entry
ecj03010                    Pathway                                
Name
Ribosome - Escherichia coli K-12 W3110
Class
Genetic Information Processing; Translation
Pathway map
ecj03010  Ribosome
ecj03010

Other DBs
PDB: 1FFK 1J5E 4V4A 4YBB 4V6U 4V6X 4UG0 4V88 3A1Y
Organism
Escherichia coli K-12 W3110 [GN:ecj]
Gene
JW0022  rpsT; 30S ribosomal subunit protein S20 [KO:K02968]
JW0164  rpsB; 30S ribosomal subunit protein S2 [KO:K02967]
JW0894  rpsA; 30S ribosomal subunit protein S1 [KO:K02945]
JW1075  rpmF; 50S ribosomal subunit protein L32 [KO:K02911]
JW1706  rplT; 50S ribosomal subunit protein L20 [KO:K02887]
JW1707  rpmI; 50S ribosomal subunit protein L35 [KO:K02916]
JW2173  rplY; 50S ribosomal subunit protein L25 [KO:K02897]
JW2587  rplS; 50S ribosomal subunit protein L19 [KO:K02884]
JW2590  rpsP; 30S ribosomal subunit protein S16 [KO:K02959]
JW3037  rpsU; 30S ribosomal subunit protein S21 [KO:K02970]
JW3134  rpsO; 30S ribosomal subunit protein S15 [KO:K02956]
JW3152  rpmA; 50S ribosomal subunit protein L27 [KO:K02899]
JW3153  rplU; 50S ribosomal subunit protein L21 [KO:K02888]
JW3199  rpsI; 30S ribosomal subunit protein S9 [KO:K02996]
JW3200  rplM; 50S ribosomal subunit protein L13 [KO:K02871]
JW3256  rplQ; 50S ribosomal subunit protein L17 [KO:K02879]
JW3258  rpsD; 30S ribosomal subunit protein S4 [KO:K02986]
JW3259  rpsK; 30S ribosomal subunit protein S11 [KO:K02948]
JW3260  rpsM; 30S ribosomal subunit protein S13 [KO:K02952]
JW3261  rpmJ; 50S ribosomal subunit protein L36 [KO:K02919]
JW3263  rplO; 50S ribosomal subunit protein L15 [KO:K02876]
JW3264  rpmD; 50S ribosomal subunit protein L30 [KO:K02907]
JW3265  rpsE; 30S ribosomal subunit protein S5 [KO:K02988]
JW3266  rplR; 50S ribosomal subunit protein L18 [KO:K02881]
JW3267  rplF; 50S ribosomal subunit protein L6 [KO:K02933]
JW3268  rpsH; 30S ribosomal subunit protein S8 [KO:K02994]
JW3269  rpsN; 30S ribosomal subunit protein S14 [KO:K02954]
JW3270  rplE; 50S ribosomal subunit protein L5 [KO:K02931]
JW3271  rplX; 50S ribosomal subunit protein L24 [KO:K02895]
JW3272  rplN; 50S ribosomal subunit protein L14 [KO:K02874]
JW3273  rpsQ; 30S ribosomal subunit protein S17 [KO:K02961]
JW3274  rpmC; 50S ribosomal subunit protein L29 [KO:K02904]
JW3275  rplP; 50S ribosomal subunit protein L16 [KO:K02878]
JW3276  rpsC; 30S ribosomal subunit protein S3 [KO:K02982]
JW3277  rplV; 50S ribosomal subunit protein L22 [KO:K02890]
JW3278  rpsS; 30S ribosomal subunit protein S19 [KO:K02965]
JW3279  rplB; 50S ribosomal subunit protein L2 [KO:K02886]
JW3280  rplW; 50S ribosomal subunit protein L23 [KO:K02892]
JW3281  rplD; 50S ribosomal subunit protein L4 [KO:K02926]
JW3282  rplC; 50S ribosomal subunit protein L3 [KO:K02906]
JW3283  rpsJ; 30S ribosomal subunit protein S10 [KO:K02946]
JW3303  rpsG; 30S ribosomal subunit protein S7 [KO:K02992]
JW3304  rpsL; 30S ribosomal subunit protein S12 [KO:K02950]
JW3611  rpmG; 50S ribosomal subunit protein L33 [KO:K02913]
JW3612  rpmB; 50S ribosomal subunit protein L28 [KO:K02902]
JW3680  rpmH; 50S ribosomal subunit protein L34 [KO:K02914]
JW3907  rpmE; 50S ribosomal subunit protein L31 [KO:K02909]
JW3946  rplK; 50S ribosomal subunit protein L11 [KO:K02867]
JW3947  rplA; 50S ribosomal subunit protein L1 [KO:K02863]
JW3948  rplJ; 50S ribosomal subunit protein L10 [KO:K02864]
JW3949  rplL; 50S ribosomal subunit protein L7/L12 [KO:K02935]
JW4158  rpsF; 30S ribosomal subunit protein S6 [KO:K02990]
JW4160  rpsR; 30S ribosomal subunit protein S18 [KO:K02963]
JW4161  rplI; 50S ribosomal subunit protein L9 [KO:K02939]
JW5034  ykgM; predicted ribosomal protein [KO:K02919]
JW5035  ykgM; predicted ribosomal protein [KO:K02909]
JWR0001  rrsH; 16S ribosomal RNA [KO:K01977]
JWR0004  rrlH; 23S ribosomal RNA [KO:K01980]
JWR0005  rrfH; 5S ribosomal RNA [KO:K01985]
JWR0051  rrfG; 5S ribosomal RNA [KO:K01985]
JWR0052  rrlG; 23S ribosomal RNA [KO:K01980]
JWR0054  rrsG; 16S ribosomal RNA [KO:K01977]
JWR0073  rrfF; 5S ribosomal RNA [KO:K01985]
JWR0075  rrfD; 5S ribosomal RNA [KO:K01985]
JWR0076  rrlD; 23S ribosomal RNA [KO:K01980]
JWR0079  rrsD; 16S ribosomal RNA [KO:K01977]
JWR0082  rrsC; 16S ribosomal RNA [KO:K01977]
JWR0084  rrlC; 23S ribosomal RNA [KO:K01980]
JWR0085  rrfC; 5S ribosomal RNA [KO:K01985]
JWR0092  rrsA; 16S ribosomal RNA [KO:K01977]
JWR0095  rrlA; 23S ribosomal RNA [KO:K01980]
JWR0096  rrfA; 5S ribosomal RNA [KO:K01985]
JWR0099  rrsB; 16S ribosomal RNA [KO:K01977]
JWR0101  rrlB; 23S ribosomal RNA [KO:K01980]
JWR0102  rrfB; 5S ribosomal RNA [KO:K01985]
JWR0107  rrsE; 16S ribosomal RNA [KO:K01977]
JWR0109  rrlE; 23S ribosomal RNA [KO:K01980]
JWR0110  rrfE; 5S ribosomal RNA [KO:K01985]
Reference
  Authors
Ban N, Nissen P, Hansen J, Capel M, Moore PB, Steitz TA.
  Title
Placement of protein and RNA structures into a 5 A-resolution map of the 50S ribosomal subunit.
  Journal
Nature 400:841-847 (1999)
DOI:10.1038/23641
Reference
  Authors
Clemons WM Jr, May JL, Wimberly BT, McCutcheon JP, Capel MS, Ramakrishnan V.
  Title
Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.
  Journal
Nature 400:833-840 (1999)
DOI:10.1038/23631
Reference
  Authors
Cate JH, Yusupov MM, Yusupova GZ, Earnest TN, Noller HF.
  Title
X-ray crystal structures of 70S ribosome functional complexes.
  Journal
Science 285:2095-2104 (1999)
DOI:10.1126/science.285.5436.2095
Reference
  Authors
Ban N, Nissen P, Hansen J, Moore PB, Steitz TA.
  Title
The complete atomic structure of the large ribosomal subunit at 2.4 A resolution.
  Journal
Science 289:905-920 (2000)
DOI:10.1126/science.289.5481.905
Reference
  Authors
Nissen P, Hansen J, Ban N, Moore PB, Steitz TA.
  Title
The structural basis of ribosome activity in peptide bond synthesis.
  Journal
Science 289:920-930 (2000)
DOI:10.1126/science.289.5481.920
Reference
  Authors
Wimberly BT, Brodersen DE, Clemons WM Jr, Morgan-Warren RJ, Carter AP, Vonrhein C, Hartsch T, Ramakrishnan V.
  Title
Structure of the 30S ribosomal subunit.
  Journal
Nature 407:327-339 (2000)
DOI:10.1038/35030006
Reference
  Authors
Carter AP, Clemons WM, Brodersen DE, Morgan-Warren RJ, Wimberly BT, Ramakrishnan V.
  Title
Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.
  Journal
Nature 407:340-348 (2000)
DOI:10.1038/35030019
Reference
  Authors
Noeske J, Wasserman MR, Terry DS, Altman RB, Blanchard SC, Cate JH
  Title
High-resolution structure of the Escherichia coli ribosome.
  Journal
Nat Struct Mol Biol 22:336-41 (2015)
DOI:10.1038/nsmb.2994
Reference
  Authors
Armache JP, Anger AM, Marquez V, Franckenberg S, Frohlich T, Villa E, Berninghausen O, Thomm M, Arnold GJ, Beckmann R, Wilson DN
  Title
Promiscuous behaviour of archaeal ribosomal proteins: implications for eukaryotic ribosome evolution.
  Journal
Nucleic Acids Res 41:1284-93 (2013)
DOI:10.1093/nar/gks1259
Reference
  Authors
Anger AM, Armache JP, Berninghausen O, Habeck M, Subklewe M, Wilson DN, Beckmann R
  Title
Structures of the human and Drosophila 80S ribosome.
  Journal
Nature 497:80-5 (2013)
DOI:10.1038/nature12104
Reference
  Authors
Khatter H, Myasnikov AG, Natchiar SK, Klaholz BP
  Title
Structure of the human 80S ribosome.
  Journal
Nature 520:640-5 (2015)
DOI:10.1038/nature14427
Reference
  Authors
Naganuma T, Nomura N, Yao M, Mochizuki M, Uchiumi T, Tanaka I
  Title
Structural basis for translation factor recruitment to the eukaryotic/archaeal ribosomes.
  Journal
J Biol Chem 285:4747-56 (2010)
DOI:10.1074/jbc.M109.068098
KO pathway
ko03010   

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