Escherichia coli K-12 W3110: JW0430
Help
Entry
JW0430 CDS
T00068
Symbol
hupB
Name
(GenBank) HU, DNA-binding transcriptional regulator, beta subunit
KO
K03530
DNA-binding protein HU-beta
Organism
ecj
Escherichia coli K-12 W3110
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecj03032
]
JW0430 (hupB)
03036 Chromosome and associated proteins [BR:
ecj03036
]
JW0430 (hupB)
03400 DNA repair and recombination proteins [BR:
ecj03400
]
JW0430 (hupB)
DNA replication proteins [BR:
ecj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JW0430 (hupB)
Chromosome and associated proteins [BR:
ecj03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JW0430 (hupB)
DNA repair and recombination proteins [BR:
ecj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JW0430 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BAE76220
UniProt:
P0ACF4
Structure
PDB
PDBj
LinkDB
All DBs
Position
460675..460947
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTG
RNPQTGKEITIAAAKVPSFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctcaattgatcgacaagattgctgcaggggctgatatctctaaagctgcg
gctggccgtgcgttagatgctattattgcttccgtaactgaatctctgaaagaaggggat
gatgtagcactggtaggttttggtacttttgccgttaaagagcgtgctgcccgtactggc
cgcaacccgcagaccggtaaagagatcaccatcgctgctgctaaagtaccgagcttccgt
gcaggtaaagcactgaaagacgcggtaaactaa
DBGET
integrated database retrieval system
