Escherichia coli K-12 W3110: JW0491
Help
Entry
JW0491 CDS
T00068
Symbol
ybbB
Name
(GenBank) tRNA 2-selenouridine synthase, selenophosphate-dependent
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
ecj
Escherichia coli K-12 W3110
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecj03016
]
JW0491 (ybbB)
Enzymes [BR:
ecj01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
JW0491 (ybbB)
Transfer RNA biogenesis [BR:
ecj03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
JW0491 (ybbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
T2SSE
AAA_18
AAA_16
AAA_23
DUF3333
Motif
Other DBs
NCBI-ProteinID:
BAE76281
UniProt:
P33667
LinkDB
All DBs
Position
complement(529356..530450)
Genome browser
AA seq
364 aa
AA seq
DB search
MQERHTEQDYRALLIADTPIIDVRAPIEFEHGAMPAAINLPLMNNDERAAVGTCYKQQGS
DAALALGHKLVAGEIRQQRMDAWRAACLQNPQGILCCARGGQRSHIVQSWLHAAGIDYPL
VEGGYKALRQTAIQATIELAQKPIVLIGGCTGSGKTLLVQQQPNGVDLEGLARHRGSAFG
RTLQPQLSQASFENLLAAEMLKTDARQNLRLWVLEDESRMIGSNHLPECLRERMTQAAIA
VVEDPFEIRLERLNEEYFLRMHHDFTHAYGDEQGWQEYCEYLHHGLSAIKRRLGLQRYNE
LAARLDAALTTQLTTGSTDGHLAWLVPLLEEYYDPMYRYQLEKKAEKVVFRGEWAEVAEW
VKAR
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagagacacacggaacaggactatcgtgccctgctgattgctgatacgcccatt
attgatgttcgcgcccctatcgagtttgagcacggcgcaatgcccgccgctatcaatctg
ccgttaatgaataacgatgaacgcgccgccgttggcacctgctataaacagcaaggctca
gacgcagcgctggcgctgggacataaactggtggcgggtgaaattcgtcagcagcgcatg
gacgcctggcgggcagcgtgcctgcaaaatccgcaaggtattctctgctgcgcccgtggc
ggtcagcgctcacatattgtgcaaagctggttgcatgcagcggggattgattatccgctg
gtggaaggcggttataaggcactgcgccagaccgcgattcaggcgactattgaactggca
caaaaaccgatagtgctgattggcggttgtaccggcagcggtaaaacgctgttagtgcag
caacagccgaacggtgttgatctggaagggttggcgcgtcatcgcggttcggcgtttggt
cgcacgttacaaccacaacttagccaggcgagttttgaaaacctgctggctgccgaaatg
ctaaaaaccgacgcccgtcagaatttgcgcctgtgggtgctggaagacgaaagccggatg
atcggttcgaatcacctgccggaatgcctgcgcgagcgaatgactcaggcggcgattgcg
gtggtagaagatccgtttgagatccgtcttgagcgcctgaacgaagagtatttcttgcgt
atgcatcatgattttacccacgcgtacggcgacgaacagggctggcaggagtattgcgaa
tacctgcatcacggactttcggcgattaagcgtcggctggggctacagcgctataacgaa
ctggctgcaaggctggatgcagcactgacaacgcaactcaccaccggcagcaccgacggt
catctggcctggctggtgccgttacttgaagaatattacgacccgatgtatcgctatcag
cttgagaaaaaagcggaaaaagttgtctttcgcggtgagtgggcggaagtggcggaatgg
gttaaggcgcggtaa
DBGET
integrated database retrieval system
