Escherichia coli K-12 W3110: JW0521
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Entry
JW0521 CDS
T00068
Symbol
sfmD
Name
(GenBank) predicted outer membrane export usher protein
KO
K07354
outer membrane usher protein
Organism
ecj
Escherichia coli K-12 W3110
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ecj02035
]
JW0521 (sfmD)
Bacterial motility proteins [BR:
ecj02035
]
Pilus system
Fimbrial proteins
JW0521 (sfmD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
DUF4888
Motif
Other DBs
NCBI-ProteinID:
BAE76309
UniProt:
P77468
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All DBs
Position
558920..561523
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AA seq
867 aa
AA seq
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MKIPTTTDIPQRYTWCLAGICYSSLAILPSFLSYAESYFNPAFLLENGTSVADLSRFERG
NHQPAGVYRVDLWRNDEFIGSQDIVFESTTENTGDKSGGLMPCFNQVLLERIGLNSSAFP
ELAQQQNNKCINLLKAVPDATINFDFAAMRLNITIPQIALLSSAHGYIPPEEWDEGIPAL
LLNYNFTGNRGNGNDSYFFSELSGINIGPWRLRNNGSWNYFRGNGYHSEQWNNIGTWVQR
AIIPLKSELVMGDGNTGSDIFDGVGFRGVRLYSSDNMYPDSQQGFAPTVRGIARTAAQLT
IRQNGFIIYQSYVSPGAFEITDLHPTSSNGDLDVTIDERDGNQQNYTIPYSTVPILQREG
RFKFDLTAGDFRSGNSQQSSPFFFQGTALGGLPQEFTAYGGTQLSANYTAFLLGLGRNLG
NWGAVSLDVTHARSQLADASRHEGDSIRFLYAKSMNTFGTNFQLMGYRYSTQGFYTLDDV
AYRRMEGYEYDYDGEHRDEPIIVNYHNLRFSRKDRLQLNVSQSLNDFGSLYISGTHQKYW
NTSDSDTWYQVGYTSSWVGISYSLSFSWNESVGIPDNERIVGLNVSVPFNVLTKRRYTRE
NALDRAYASFNANRNSNGQNSWLAGVGGTLLEGHNLSYHVSQGDTSNNGYTGSATANWQA
AYGTLGGGYNYDRDQHDVNWQLSGGVVGHENGITLSQPLGDTNVLIKAPGAGGVRIENQT
GILTDWRGYAVMLYATVYRYNRIALDTNTMGNSIDVEKNISSVVPTQGALVRANFDTRIG
VRALITVTQGGKPVPFGSLVRENSTGITSMVGDDGQVYLSGAPLSGELLVQWGDGANSRC
IAHYVLPKQSLQQAVTVISAVCTHPGS
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacccactactacggatattccgcagaggtatacctggtgtctggccggaatt
tgttattcatctcttgccattttaccctcctttttaagctatgcggaaagttatttcaac
ccggcatttttattagagaatggcacatccgttgctgatttatcgcgctttgagagaggt
aatcatcaacctgcgggcgtgtatcgggtggatctctggcgtaatgatgagttcattggt
tcgcaggatatcgtatttgaatcgacaacagaaaatacaggtgataaatcaggtgggtta
atgccctgttttaaccaggtacttcttgaacgaattggccttaatagcagtgcatttccc
gagttagcccagcagcaaaacaataaatgcatcaatttactgaaagctgtacctgatgcc
acaattaactttgattttgcagcgatgcgcctgaacatcactattcctcagatagcgttg
ttgagtagcgctcacggttacattccgcctgaagagtgggatgaaggtattcctgcttta
ctcctgaattataatttcaccggtaacagaggtaatggtaacgatagctatttttttagt
gagctcagcgggattaatattggcccgtggcgtttacgcaacaatggttcctggaactat
tttcgcggaaatggatatcattcagaacagtggaataatattggcacctgggtacagcgc
gccattattccgctgaaaagtgaactggtaatgggagacggcaatacaggaagtgatatt
ttcgatggcgttggatttcgtggtgtacggctttattcttctgataatatgtatcctgat
agccagcaagggtttgccccaacggtacgtgggattgcccgtacggcggcccagctaacg
attcggcaaaatggttttattatctatcaaagctatgtttcccccggcgcttttgaaatt
acagatttgcacccgacatcttcaaatggcgatctggacgtcaccatcgacgagcgcgat
ggcaatcagcagaattacacaattccgtattcaacagtgccaattttacaacgcgaaggg
cgtttcaaatttgacctgacggcgggcgattttcgtagcggtaatagtcagcaatcatcg
cctttcttttttcagggtacggcactcggcggtttaccacaggaatttactgcctacggc
gggacgcaattatctgccaattacaccgcctttttattagggctggggcgcaatctcggg
aactggggcgcagtgtcgctggatgtaacgcatgcgcgcagtcagttagccgacgccagt
cgtcatgagggggattctattcgcttcctctatgcgaaatcgatgaacaccttcggcacc
aattttcagttaatgggttaccgctattcgacacaaggtttttatacccttgatgatgtt
gcgtatcgtcgaatggaggggtacgaatatgattacgacggtgagcatcgcgatgaaccg
ataatcgtgaattaccacaatttacgctttagccgtaaagaccgtttgcagttaaatgtt
tcacaatcacttaatgactttggctcgctttatatttctggtacccatcaaaaatactgg
aatacttcggattcagatacgtggtatcaggtggggtataccagcagctgggttggcatc
agttattcgctctcattttcgtggaatgaatctgtagggatccccgataacgaacgtatt
gtcggacttaatgtttcagtgcctttcaatgttttgaccaaacgtcgctacacccgggaa
aatgcgctcgaccgcgcttatgcctcctttaacgccaaccgtaacagcaacgggcaaaat
agctggctggcaggtgtaggtgggaccttactggaaggccacaacctgagttatcacgta
agccagggtgatacctcgaataatgggtacacgggcagcgccacggcaaactggcaggcc
gcttacggtacgctggggggcgggtataactacgaccgcgatcaacatgacgttaactgg
cagctgtctggcggtgtggtcgggcatgaaaatggcataacgctgagccagcctttaggg
gataccaatgttttgattaaagcgcctggcgcaggcggtgtacgcattgaaaatcaaact
ggcattttaaccgactggcgcggctatgcggtgatgctgtatgccacggtttatcggtat
aaccgtatcgcgcttgataccaatacgatggggaattccatcgatgttgaaaaaaatatt
agcagcgttgtgccgacgcaaggcgcgttggttcgtgccaattttgatacccgcataggc
gtgcgggcgctcattaccgttacccagggcggaaaaccggtgccgtttggatcactggta
cgggaaaacagtaccggaataaccagtatggtgggtgatgacgggcaagtttatttaagt
ggtgcgccattgtctggtgaattactggttcagtggggagacggcgcgaactcacgctgc
attgcgcactatgtattgccgaagcaaagcttacagcaagccgtcactgttatttcggca
gtttgcacacatcctggctcataa
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