Escherichia coli K-12 W3110: JW0553
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Entry
JW0553 CDS
T00068
Symbol
appY
Name
(GenBank) DNA-binding transcriptional activator
KO
K07780
AraC family transcriptional regulator, transcriptional regulator required for anaerobic and stationary phase induction of genes
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JW0553 (appY)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecj03000
]
JW0553 (appY)
Transcription factors [BR:
ecj03000
]
Prokaryotic type
Helix-turn-helix
AraC family
JW0553 (appY)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HSD_C
AMOP
Motif
Other DBs
NCBI-ProteinID:
BAE76339
UniProt:
P05052
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All DBs
Position
582904..583653
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AA seq
249 aa
AA seq
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MDYVCSVVFICQSFDLIINRRVISFKKNSLFIVSDKIRRELPVCPSKLRIVDIDKKTCLS
FFIDVNNELPGKFTLDKNGYIAEEEPPLSLVFSLFEGIKIADSHSLWLKERLCISLLAMF
KKRESVNSFILTNINTFTCKITGIISFNIERQWHLKDIAELIYTSESLIKKRLRDEGTSF
TEILRDTRMRYAKKLITSNSYSINVVAQKCGYNSTSYFICAFKDYYGVTPSHYFEKIIGV
TDGINKTID
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggattatgtttgctccgtagttttcatctgtcaatcatttgatttaattataaacagg
agagttatctcgttcaaaaaaaattcattgtttattgtaagcgacaaaattagaagggag
ttaccagtatgcccctctaaactaagaattgttgatatagataagaaaacatgtttatcc
ttttttatcgacgtgaataatgagctgcctggcaaatttactcttgataagaatggctat
attgctgaagaggaacctccattatcgcttgttttttctctgtttgaagggattaaaata
gcagactcacactccctttggttaaaagaaagactatgtatatccttacttgccatgttc
aaaaaacgcgaaagtgtaaattcatttatactaacaaatataaatacatttacctgtaaa
attactggaataatcagttttaatattgagcggcaatggcatttaaaagatattgcggaa
ttgatttatacgagtgaaagtttaataaaaaaaagattaagggatgaaggaacgtcattt
actgaaatattgagagatactaggatgaggtatgcaaaaaaactcataacttcaaactct
tattctatcaatgtcgtagcccagaaatgtggctataacagtacttcatatttcatatgt
gcatttaaagattattatggtgtcacgccatctcattattttgagaaaataatcggcgtc
acagatggaataaacaaaacaattgactga
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