Escherichia coli K-12 W3110: JW0635
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Entry
JW0635 CDS
T00068
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj03030
DNA replication
ecj03430
Mismatch repair
ecj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JW0635 (holA)
03430 Mismatch repair
JW0635 (holA)
03440 Homologous recombination
JW0635 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecj03032
]
JW0635 (holA)
03400 DNA repair and recombination proteins [BR:
ecj03400
]
JW0635 (holA)
Enzymes [BR:
ecj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JW0635 (holA)
DNA replication proteins [BR:
ecj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JW0635 (holA)
DNA repair and recombination proteins [BR:
ecj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JW0635 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
BAA35287
UniProt:
P28630
Structure
PDB
PDBj
LinkDB
All DBs
Position
complement(670996..672027)
Genome browser
AA seq
343 aa
AA seq
DB search
MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAAQGFEEHHTFSIDPNTD
WNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTGLLHDDLLLIVRGNKLSKA
QENAAWFTALANRSVQVTCQTPEQAQLPRWVAARAKQLNLELDDAANQVLCYCYEGNLLA
LAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEG
SEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRGMMGEALNRLSQTQLRQ
AVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHKPLADVFIDG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattcggttgtacccggaacaactccgcgcgcagctcaatgaagggctgcgcgcggcg
tatcttttacttggtaacgatcctctgttattgcaggaaagccaggacgctgttcgtcag
gtagctgcggcacaaggattcgaagaacaccacactttttccattgatcccaacactgac
tggaatgcgatcttttcgttatgccaggctatgagtctgtttgccagtcgacaaacgcta
ttgctgttgttaccagaaaacggaccgaatgcggcgatcaatgagcaacttctcacactc
accggacttctgcatgacgacctgctgttgatcgtccgcggtaataaattaagcaaagcg
caagaaaatgccgcctggtttactgcgcttgcgaatcgcagcgtgcaggtgacctgtcag
acaccggagcaggctcagcttccccgctgggttgctgcgcgcgcaaaacagctcaactta
gaactggatgacgcggcaaatcaggtgctctgctactgttatgaaggtaacctgctggcg
ctggctcaggcactggagcgtttatcgctgctctggccagacggcaaattgacattaccg
cgcgttgaacaggcggtgaatgatgccgcgcatttcaccccttttcattgggttgatgct
ttgttgatgggaaaaagtaagcgcgcattgcatattcttcagcaactgcgtctggaaggc
agcgaaccggttattttgttgcgcacattacaacgtgaactgttgttactggttaacctg
aaacgccagtctgcccatacgccactgcgtgcgttgtttgataagcatcgggtatggcag
aaccgccggggcatgatgggcgaggcgttaaatcgcttaagtcagacgcagttacgtcag
gccgtgcaactcctgacacgaacggaactcaccctcaaacaagattacggtcagtcagtg
tgggcagagctggaagggttatctcttctgttgtgccataaacccctggcggacgtattt
atcgacggttga
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