Escherichia coli K-12 W3110: JW0723
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Entry
JW0723 CDS
T00068
Symbol
cydB
Name
(GenBank) cytochrome d terminal oxidase, subunit II
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj00190
Oxidative phosphorylation
ecj01100
Metabolic pathways
ecj02020
Two-component system
Module
ecj_M00153
Cytochrome bd ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
JW0723 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JW0723 (cydB)
Enzymes [BR:
ecj01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
JW0723 (cydB)
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Motif
Pfam:
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-ProteinID:
BAA35400
UniProt:
P0ABK2
Structure
PDB
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Position
773464..774603
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AA seq
379 aa
AA seq
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MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDTERRIMINSIAPHWDGN
QVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPVGFDYRSKIEETRWRNMWD
WGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGNFFQLLNPFGLLAGVVSVGMI
ITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALAGVWVMYGIDGYVVKSTMDHYAA
SNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLPLLTILTARMDKAAWAFVFSSLTLA
CIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQLTLNVMTWVAVVLVPIILLYTAWCYW
KMFGRITKEDIERNTHSLY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgatcgattatgaagtattgcgttttatctggtggctgctggttggcgttctgctgatt
ggttttgcagtcactgacggtttcgacatgggggtgggcatgctcacccgtttcctcggt
cgtaacgacaccgagcgtcgaattatgattaactccattgcaccacactgggacggtaac
caggtttggctgatcaccgcgggcggcgcactctttgctgcctggccgatggtctatgcc
gctgcgttctccggcttctatgtggcgatgatcctcgtgctggcgtctttgttcttccgt
ccggtcggttttgactaccgctccaagattgaagaaacccgctggcgtaacatgtgggac
tggggcatcttcattggtagcttcgttccgccgctggtaattggtgtagcgttcggtaac
ctgttgcagggcgtaccgttcaacgttgatgaatatctgcgtctgtactacaccggtaac
ttcttccagttgcttaacccgttcggcctgctggcaggcgtggtgagcgtagggatgatc
attactcagggcgcaacctatctgcaaatgcgtaccgtgggcgaactgcacctgcgtacc
cgtgcaacggctcaggtggctgcgctggtgacactggtctgtttcgcactggctggcgta
tgggtgatgtacggtatcgatggttatgtcgtgaaatcgacaatggaccattacgcagcc
tctaacccactgaataaagaagtggttcgtgaagctggcgcatggctggttaacttcaac
aacacgccaattctgtgggctattccggcactgggtgtggttctgccgctgctgaccatc
ctgactgcacgtatggataaagccgcgtgggcgtttgtgttctcctccctgacgctggcc
tgcatcatcctgacagccggtatcgcaatgttcccgtttgtgatgccgtccagcaccatg
atgaacgcaagtctgacaatgtgggatgcaacttccagccagctgacgcttaacgtcatg
acctgggttgcggtggttctggtaccgatcattctgctctacaccgcctggtgttactgg
aaaatgttcggtcgtatcaccaaagaagatattgaacgtaacacccactctctgtactaa
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