Escherichia coli K-12 W3110: JW0876
Help
Entry
JW0876 CDS
T00068
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JW0876 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecj01007
]
JW0876 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecj03016
]
JW0876 (serS)
Enzymes [BR:
ecj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
JW0876 (serS)
Amino acid related enzymes [BR:
ecj01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
JW0876 (serS)
Transfer RNA biogenesis [BR:
ecj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JW0876 (serS)
Prokaryotic type
JW0876 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Filament
CENP-F_leu_zip
CCDC39
DUF3450
UPF0242
Motif
Other DBs
NCBI-ProteinID:
BAA35625
UniProt:
P0A8L1
Structure
PDB
PDBj
LinkDB
All DBs
Position
939850..941142
Genome browser
AA seq
430 aa
AA seq
DB search
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ
AKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDN
VEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFM
LDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEV
PLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPED
SMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCS
NVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLR
PYMNGLEYIG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcccaatctgctgcgtaatgagccagacgcagtcgctgaaaaactggcacgc
cggggctttaagctggatgtagataagctgggcgctcttgaagagcgtcgtaaagtattg
caggtcaaaacggaaaacctgcaagcggagcgtaactcccgatcgaaatccattggccag
gcgaaagcgcgcggggaagatatcgagcctttacgtctggaagtgaacaaactgggcgaa
gagctggatgcagcaaaagccgagctggatgctttacaggctgaaattcgcgatatcgcg
ctgaccatccctaacctgcctgcagatgaagtgccggtaggtaaagacgaaaatgacaac
gttgaagtcagccgctggggtaccccgcgtgagtttgactttgaagttcgtgaccacgtg
acgctgggtgaaatgcactctggcctcgactttgcagctgcagttaagctgactggttcc
cgctttgtggtaatgaaagggcagattgctcgcatgcaccgcgcactgtcgcagtttatg
ctggatctgcataccgaacagcatggctacagtgagaactatgttccgtacctggttaac
caggacacgctgtacggtacgggtcaactgccgaaatttgctggcgatctgttccatact
cgtccgctggaagaagaagcagacaccagtaactatgcgctgatcccaacggcagaagtt
ccgctgactaacctggtgcgcggtgaaatcatcgatgaagatgatctgccaattaagatg
accgcccacaccccatgcttccgttctgaagccggttcatatggtcgtgacacccgtggt
ctgatccgtatgcaccagttcgacaaagttgaaatggtgcagatcgtgcgcccagaagac
tcaatggcggcgctggaagagatgactggtcatgcagaaaaagtcctgcagttgctgggc
ctgccgtaccgtaaaatcatcctttgcactggcgacatgggctttggcgcttgcaaaact
tacgacctggaagtatggatcccggcacagaacacctaccgtgagatctcttcctgctcc
aacgtttgggatttccaggcacgtcgtatgcaggcacgttgccgcagcaagtcggacaag
aaaacccgtctggttcataccctgaacggttctggtctggctgttggtcgtacgctggtt
gcagtaatggaaaactatcagcaggctgatggtcgtattgaagtaccagaagttctgcgt
ccgtatatgaacggactggaatatattggctaa
DBGET
integrated database retrieval system
