Escherichia coli K-12 W3110: JW0908 Help Entry JW0908            CDS       T00068                                  Symbol ycbB Name (GenBank) predicted carboxypeptidase   KO K21470   L,D-transpeptidase YcbB Organism ecj  Escherichia coli K-12 W3110 Brite KEGG Orthology (KO) [BR:ecj00001]  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:ecj01002]     JW0908 (ycbB)    01011 Peptidoglycan biosynthesis and degradation proteins [BR:ecj01011]     JW0908 (ycbB) Peptidases and inhibitors [BR:ecj01002]  Cysteine peptidases   Family C82    JW0908 (ycbB) Peptidoglycan biosynthesis and degradation proteins [BR:ecj01011]  Peptidoglycan biosynthesis and degradation   Transpeptidase    JW0908 (ycbB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  YkuD Scaffold PG_binding_1 Motif Other DBs NCBI-ProteinID:  BAA35671 UniProt:  P22525 Structure PDBPDBj LinkDB All DBs Position 981469..983316 Genome browser AA seq 615 aa AA seqDB search MLLNMMCGRQLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAVSEQGEALPQAQATAIM AGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARDMQPMWENRDAVKAFQQQL AEVAIAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGYLHFIANIPVKGTRWLYSSKP YALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQYAAMHESLLALLCDTKPWPQLTGK ATLRPGQWSNDVPALREILQRTGMLDGGPKITLPGDDTPTDAVVSPSAVTVETAETKPMD KQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLA LNIQRLRLLPTELSTGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVV VNPPWNVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLP FRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANM LLQDAGWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPA RSSSQIVSKAEQLIR NT seq 1848 nt NT seq  +upstreamnt  +downstreamnt atgttgcttaatatgatgtgtggtcgtcagctgtcggcaatcagtttgtgcctggccgta acattcgctccactgttcaatgcgcaggccgatgagcctgaagtaatccctggcgacagc ccggtggctgtcagtgaacagggcgaggcactgccgcaggcgcaagccacggcaataatg gcggggatccagccattgcctgaaggtgcggcagaaaaagcccgcacgcaaatcgaatct caattacccgcaggttacaagccggtttatcttaaccagcttcaactgttgtatgccgca cgcgatatgcaacccatgtgggaaaaccgtgatgctgttaaagccttccagcaacagctg gcagaggtggcgattgccggtttccagccgcagtttaataaatgggtagagttactgacc gatcctggtgttaacgggatggcacgcgacgtggtgctctctgatgcgatgatgggctat ctccatttcattgcaaatattccggtcaaaggcactcgctggctatatagcagtaaacct tatgcacttgcaacgccgccgctctcggtgattaaccaatggcagctggcgctggataaa ggtcaattgcctacgtttgttgcaggactggcaccgcagcatccgcaatatgcggcgatg catgaatcgttactggccttactctgtgacaccaaaccgtggccccaactgaccggcaaa gcaacgttgcgcccagggcagtggagtaacgacgtaccggcgttgcgcgaaatattgcaa cgcacaggcatgttggacggggggccgaaaattactctacctggcgatgacacgccaact gacgcggtagtcagcccatccgctgttactgttgaaacagcagaaactaagccgatggat aagcaaacgacgtctcgtagtaaacctgcgcctgccgttcgcgccgcctacgataatgaa ctggtggaagccgttaaacgttttcaggcatggcaaggattgggggcagatggtgctatt ggcccggcaacacgtgactggttaaacgtaacgcccgcccagcgtgctggtgtgttggct ctcaacatccagcgattgcgcttgctgccaacagagctttctaccgggatcatggttaac attccggcctattcgctggtctactatcagaacggcaatcaggtgctggattcgcgagtc attgtcggtcgccccgatcgcaaaacgccgatgatgagcagtgcccttaacaacgtagtg gtaaacccgccgtggaacgtacctccaactctggcacgcaaagatattctgccaaaagtg cgcaacgatccgggatatctcgaaagccatggctatacggtgatgcgcggctggaacagc agagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccg ttccgcttccagcaggctccaggcccacggaactcgctggggcgctataaattcaatatg ccgagttcagaggccatttatttgcatgacacgccgaaccacaatctgttcaagcgtgat acacgcgcattgagctcaggctgtgtacgagtgaataaagcttccgatctggcgaatatg ctgttgcaggatgcaggctggaatgacaaacgtatttctgatgcgctgaagcagggtgat acacgttacgtcaatattcggcagtcgattccggtgaatctctactacctgacggccttt gttggtgcagatggtcgtacccagtatcgtacagatatttacaattatgatctgcctgcg cgatccagctcgcaaatcgtatcgaaagcggaacaattaatcaggtaa

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