Escherichia coli K-12 W3110: JW0998
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Entry
JW0998 CDS
T00068
Symbol
ycdC
Name
(GenBank) predicted DNA-binding transcriptional regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
ecj
Escherichia coli K-12 W3110
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecj03000
]
JW0998 (ycdC)
Transcription factors [BR:
ecj03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
JW0998 (ycdC)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
Motif
Other DBs
NCBI-ProteinID:
BAA35790
UniProt:
P0ACU2
Structure
PDB
PDBj
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All DBs
Position
1074664..1075302
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AA seq
212 aa
AA seq
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MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFP
SKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEML
AGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQV
EAVTGATLRDEVFFNQTVENVQRIIIEGIRPR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaggcgcagtgaaaacaacgggtaaacgttcgcgcgcagtaagcgcgaagaaa
aaagcgattcttagcgcagcactggacactttttcacaattcggttttcacggcacaagg
ctggagcagatcgcagagttggcgggtgtttcaaaaaccaatctgctgtattactttccg
tcaaaagaggcgctgtatattgccgtgctgcggcagattctcgatatctggctggcaccg
ttaaaagcgtttcgtgaagatttcgccccgctggcggcgatcaaagagtacatccgtctg
aagctggaagtctcacgcgattatccgcaggcttcgcgcctgttctgtatggagatgctg
gcaggcgcgccgctgttaatggatgaactgacgggcgatttgaaggcattaattgatgag
aaatcggcgctgattgccggttgggtcaaaagcggcaaactcgcgccgattgatccgcag
catttgatttttatgatttgggcttccactcaacattacgccgatttcgcccctcaggtg
gaggcggtgacaggcgcgacgttgcgcgatgaggtatttttcaatcaaacggttgaaaac
gtgcagcggattattattgaggggattcgaccacgttaa
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