Escherichia coli K-12 W3110: JW1004
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Entry
JW1004 CDS
T00068
Symbol
ycdB
Name
(GenBank) conserved hypothetical protein
KO
K16301
deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
Organism
ecj
Escherichia coli K-12 W3110
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecj02000
]
JW1004 (ycdB)
Transporters [BR:
ecj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JW1004 (ycdB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dyp_perox_C
Dyp_perox_N
Motif
Other DBs
NCBI-ProteinID:
BAA35800
UniProt:
P31545
Structure
PDB
PDBj
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All DBs
Position
1083798..1085069
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AA seq
423 aa
AA seq
DB search
MQYKDENGVNEPSRRRLLKVIGALALAGSCPVAHAQKTQSAPGTLSPDARNEKQPFYGEH
QAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQRFAFLTQGGAAPETPNPRLPPLDS
GILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKMTRFPNDSLDAALCHGDVLLQ
ICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHAARSKGKETPINLLGFKDGTANP
DSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQFRVEFWDRTPLKEQQTIFGRDKQT
GAPLGMQHEHDVPDYASDPEGKVIALDSHIRLANPRTAESESSLMLRRGYSYSLGVTNSG
QLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEYVKPIGGGYFFALPGVKDANDYFGSAL
LRV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcagtataaagatgaaaacggcgtgaatgaaccgtcacgccgacgtttactgaaagtg
ataggtgcactggcgctggcgggaagttgtccggtcgctcatgcacaaaaaacgcaaagt
gcgccgggtacgctttcaccggatgctcgcaatgagaaacagccgttttatggtgagcat
caggcagggatcctgacgccacaacaggccgcaatgatgctggtggcgtttgatgtgctt
gccagcgataaagccgatcttgagcggttgtttcgcttgttgactcagcgttttgctttt
ctgactcagggcggagcagcaccagaaacgccaaatccgcgcctgccaccactcgattcc
ggcattcttggcggctacattgcgcccgataatctcaccatcacgttatcggtgggtcac
tcattgtttgatgagcgctttggccttgcgccacagatgccaaaaaagctgcagaagatg
acgcgtttccccaacgactcgctggatgcggcgttatgtcatggtgatgtgttgctacag
atttgcgccaacacccaggacacggttatccatgcgctgcgcgatatcatcaaacacacg
ccggatttgctcagtgtgcgctggaagcgggaagggtttatttccgatcacgcggcgcgt
agtaaaggcaaagagacgccgattaatttgctgggtttcaaagacggcactgccaatccc
gatagccagaatgataagttgatgcaaaaagtggtgtgggtaacggcagatcagcaggag
cctgcgtggacaatcggtggcagctatcaggcagtacgcttgattcagtttcgagtggaa
ttttgggacagaacgccgctgaaagaacagcagacgatttttggccgtgataagcaaacc
ggtgcgccgctgggaatgcagcatgagcatgatgtgcctgattacgccagcgacccggaa
gggaaggtgatcgcgctggacagccatatccggctggcgaatccccgcacggcggagagt
gagtccagcctgatgctgcgtcgtggctacagttattcactgggcgtcaccaactccggg
caactggatatggggttgctgtttgtctgctaccaacacgatctggaaaaaggcttcctg
acagtacaaaaaaggctcaatggcgaagcgctggaggaatacgttaaacctatcggcggc
ggttatttttttgcgctgccgggggtgaaggacgcgaacgattatttcggaagcgcgtta
ttgcgggtttaa
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