KEGG   Escherichia coli K-12 W3110: JW1433
Entry
JW1433            CDS       T00068                                 
Symbol
ydcQ
Name
(GenBank) predicted DNA-binding transcriptional regulator
  KO
K18843  antitoxin HicB
Organism
ecj  Escherichia coli K-12 W3110
Brite
KEGG Orthology (KO) [BR:ecj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ecj02048]
    JW1433 (ydcQ)
Prokaryotic defense system [BR:ecj02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HicA-HicB
    JW1433 (ydcQ)
SSDB
Motif
Pfam: HicB_lk_antitox HTH_3 MarR_2 HicB-like_2 HTH_24
Other DBs
NCBI-ProteinID: BAE76439
UniProt: P67697
Structure
LinkDB
Position
1511201..1511638
AA seq 145 aa
MRETVEIMRYPVTLTPAPEGGYMVSFVDIPEALTQGETVAEAMEAAKDALLTAFDFYFED
NELIPLPSPLNSHDHFIEVPLSVASKVLLLNAFLQSEITQQELARRIGKPKQEITRLFNL
HHATKIDAVQLAAKALGKELSLVMV
NT seq 438 nt   +upstreamnt  +downstreamnt
atgcgagagacagtcgaaattatgcgttatcccgtcactcttacacccgcgccggaaggc
ggttatatggtttcttttgtggatatccctgaagcgttgacccagggcgaaactgtcgct
gaagcgatggaagcggcaaaagatgctttactgaccgcatttgatttttattttgaagat
aacgagcttatccctttaccttcgccattaaatagtcacgatcactttattgaagtacct
ttgagcgtcgcctctaaggtattgctgttaaatgcttttttacagtcagaaatcactcag
caagagttagccaggcgaattggcaaacctaaacaggagattactcgcctatttaacttg
catcatgcgacaaaaatcgacgccgtccagctcgcggcaaaggcgcttggcaaagagtta
tcgctggtgatggtttaa

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