Escherichia coli K-12 W3110: JW1435
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Entry
JW1435 CDS
T00068
Symbol
ydcS
Name
(GenBank) predicted spermidine/putrescine transporter subunit
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JW1435 (ydcS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecj02000
]
JW1435 (ydcS)
Transporters [BR:
ecj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JW1435 (ydcS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Glyco_hydro_62
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
BAE76440
UniProt:
P76108
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All DBs
Position
1513368..1514513
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AA seq
381 aa
AA seq
DB search
MSKTFARSSLCALSMTIMTAHAAEPPTNLDKPEGRLDIIAWPGYIERGQTDKQYDWVTQF
EKETGCAVNVKTAATSDEMVSLMTKGGYDLVTASGDASLRLIMGKRVQPINTALIPNWKT
LDPRVVKGDWFNVGGKVYGTPYQWGPNLLMYNTKTFPTPPDSWQVVFVEQNLPDGKSNKG
RVQAYDGPIYIADAALFVKATQPQLGISDPYQLTEEQYQAVLKVLRAQHSLIHRYWHDTT
VQMSDFKNEGVVASSAWPYQANALKAEGQPVATVFPKEGVTGWADTTMLHSEAKHPVCAY
KWMNWSLTPKVQGDVAAWFGSLPVVPEGCKASPLLGEKGCETNGFNYFDKIAFWKTPIAE
GGKFVPYSRWTQDYIAIMGGR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagacatttgcccgcagcagcctgtgtgcgctcagcatgacaataatgaccgct
cacgccgccgaaccgcctaccaatttagataaaccggaagggcgactggatattatcgcc
tggccgggatacatcgaacgcggacaaactgataaacaatacgactgggtaacgcagttc
gaaaaagagacaggctgcgcggtgaatgtgaaaaccgccgcgacttccgatgaaatggtc
agtctgatgaccaaagggggttacgatctggttacggcatccggcgatgcctcgctgcgt
ttgattatgggtaaacgcgtgcagccgattaataccgcattgattcccaactggaaaacg
ctcgatccgcgcgtggttaaaggcgactggtttaatgttggcggcaaagtttacggcaca
ccttaccaatgggggccgaacctgctgatgtacaacactaaaaccttcccgacgccgccg
gatagctggcaagtggtttttgttgagcaaaatctgccggacggcaagagcaataaaggc
cgcgttcaggcttatgatggccctatctatattgcggacgctgcgttgttcgttaaagcc
actcagccgcagttgggcatcagcgatccgtatcaactcaccgaagaacagtaccaggcg
gtgctgaaagtgctgcgcgctcaacacagtttgatccatcgctactggcatgacactacc
gtgcaaatgagcgatttcaaaaacgagggtgtggttgcttccagtgcctggccctatcag
gccaacgccctgaaagccgaaggccagcctgttgctaccgttttcccgaaggagggtgtt
accggttgggctgataccaccatgctgcatagcgaagcgaaacatccggtttgcgcctac
aaatggatgaactggtcattaacgccaaaagtgcagggcgatgtggcggcctggtttggc
tcgttaccggtagtgccggaagggtgtaaagccagtccgttattaggcgaaaaaggttgt
gaaaccaacggttttaactatttcgacaaaatcgccttctggaaaacgcctatagcagaa
gggggcaagtttgttccctacagtcgctggacgcaggattacattgccattatgggcggt
cgctaa
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