Escherichia coli K-12 W3110: JW1437
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Entry
JW1437 CDS
T00068
Symbol
ydcU
Name
(GenBank) predicted spermidine/putrescine transporter subunit
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
ecj
Escherichia coli K-12 W3110
Pathway
ecj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ecj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JW1437 (ydcU)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecj02000
]
JW1437 (ydcU)
Transporters [BR:
ecj02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JW1437 (ydcU)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
BAA15071
UniProt:
P77156
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All DBs
Position
1515545..1516486
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AA seq
313 aa
AA seq
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MAMNVLQSPSRPGLGKVSGFFWHNPGLGLFLLLLGPLMWFGIVYFGSLLTLLWQGFYTFD
DFTMSVTPELTLANIRALFNPANYDIILRTLTMAVAVTIASAILAFPMAWYMARYTSGKM
KAFFYIAVMLPMWASYIVKAYAWTLLLAKDGVAQWFLQHLGLEPLLTAFLTLPAVGGNTL
STSGLGRFLVFLYIWLPFMILPVQAALERLPPSLLQASADLGARPRQTFRYVVLPLAIPG
IAAGSIFTFSLTLGDFIVPQLVGPPGYFIGNMVYSQQGAIGNMPMAAAFTLVPIILIALY
LAFVKRLGAFDAL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaatgtattgcaatcaccttcacgtccaggtctgggtaaggtgtccggtttc
ttctggcataatccggggctggggctgtttttactgctgcttggcccgctaatgtggttt
ggcattgtctatttcggctcgctgctgacactgttatggcagggattttatacttttgac
gatttcaccatgtcggtaacgccggaactgacgctggcgaatatccgtgcgctgtttaat
ccggcgaattacgacatcattctccgcacgctgactatggctgtggcagtcactatcgcc
agcgccattctggcttttccaatggcgtggtatatggcgcgctataccagcgggaaaatg
aaagcgtttttttatattgcggtaatgttgccgatgtgggcgagctacattgttaaagcc
tatgcctggacgttattgctggcaaaagatggcgtggctcagtggtttttacaacatctt
gggctggaaccactgctgactgcgttccttacattacctgcggtgggcggaaatacgctg
tcaacttccgggctggggcgctttctggtgtttctctatatctggttgccgttcatgatc
ctgcccgttcaggcggcgcttgagcgtttgccgccgtcattgttgcaggcgtcggctgat
ctcggcgcacgtccacgacaaacctttcgctatgtggtgctgccgctggcaatcccgggt
attgccgctggctctatctttaccttctcactcacactgggcgattttatcgtcccgcag
ctggttggtcctccaggatattttatcggcaatatggtttattcccagcagggggcgatt
ggcaatatgccgatggcggcggcattcaccctggtgccgattattctcatcgcactgtac
ctggcgttcgtgaaacgtctgggagcgttcgatgcactctga
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